RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 OR2B3O76000 313 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 SEMA3DO95025 777 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 FTH1P19P0C7X4 201 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 G6PDP11413 515 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 CCL4P13236 92 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 CSTF2P33240 577 aaKnown RBP eCLIP12.72□□□□□ -0.37
CLK4-210ENST00000522136 BTN3A2P78410 334 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 SIM1P81133 766 aaPredicted RBP12.72□□□□□ -0.37
CLK4-210ENST00000522136 TRA2AQ13595 282 aaKnown RBP eCLIP12.72□□□□□ -0.37
CLK4-210ENST00000522136 CDCP2Q5VXM1 449 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 METTL21CQ5VZV1 264 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 TMEM214Q6NUQ4 689 aaKnown RBP12.72□□□□□ -0.37
CLK4-210ENST00000522136 LIX1Q8N485 282 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 OR8K5Q8NH50 307 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 NUDT8Q8WV74 236 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 GAL3ST3Q96A11 431 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 EGLN2Q96KS0 407 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 CENPKQ9BS16 269 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 ZNF385DQ9H6B1 395 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 AIG1Q9NVV5 245 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 SIDT1Q9NXL6 827 aaKnown RBP12.72□□□□□ -0.37
CLK4-210ENST00000522136 NOP53Q9NZM5 478 aaKnown RBP12.72□□□□□ -0.37
CLK4-210ENST00000522136 TRIM33Q9UPN9 1127 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 GPR45Q9Y5Y3 372 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 KNTC1P50748 2209 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 EFCAB7A8K855 629 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 ZSCAN9O15535 394 aaPredicted RBP12.72□□□□□ -0.37
CLK4-210ENST00000522136 PCDH7O60245 1069 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 DNAJB6O75190 326 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 MT-CO3P00414 261 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 SMIM10L1P0DMW3 83 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 IL1RNP18510 177 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 SDC1P18827 310 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 CSRP1P21291 193 aaKnown RBP12.72□□□□□ -0.37
CLK4-210ENST00000522136 TPP2P29144 1249 aaPredicted RBP12.72□□□□□ -0.37
CLK4-210ENST00000522136 TIA1P31483 386 aaKnown RBP eCLIP12.72□□□□□ -0.37
CLK4-210ENST00000522136 SSR2P43308 183 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 DEFB134Q4QY38 66 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 TRIM40Q6P9F5 258 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 CYP20A1Q6UW02 462 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 SHISA5Q8N114 240 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 SMIM10Q96HG1 83 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 FCRL1Q96LA6 429 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 C10orf90Q96M02 699 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 TSSK3Q96PN8 268 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 NLNQ9BYT8 704 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 APMAPQ9HDC9 416 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 AHSPQ9NZD4 102 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 SERTAD3Q9UJW9 196 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 EIF3LQ9Y262 564 aaKnown RBP12.72□□□□□ -0.37
CLK4-210ENST00000522136 SEC16AO15027 2179 aa12.72□□□□□ -0.37
CLK4-210ENST00000522136 HYKKA2RU49 373 aa12.71□□□□□ -0.37
CLK4-210ENST00000522136 ZNF860A6NHJ4 632 aa12.71□□□□□ -0.37
CLK4-210ENST00000522136 C9JVG2 144 aa12.71□□□□□ -0.37
CLK4-210ENST00000522136 TMPRSS11DO60235 418 aa12.71□□□□□ -0.37
CLK4-210ENST00000522136 ANXA4P09525 319 aaPredicted RBP12.71□□□□□ -0.37
CLK4-210ENST00000522136 MSL3P1P0C860 447 aa12.71□□□□□ -0.37
CLK4-210ENST00000522136 ATXN8OSP0DMR3 200 aa12.71□□□□□ -0.37
CLK4-210ENST00000522136 ATP5A1P25705 553 aaKnown RBP12.71□□□□□ -0.37
CLK4-210ENST00000522136 CERS1P27544 350 aa12.71□□□□□ -0.37
CLK4-210ENST00000522136 CCKBRP32239 447 aa12.71□□□□□ -0.37
CLK4-210ENST00000522136 ITGA1P56199 1179 aa12.71□□□□□ -0.37
CLK4-210ENST00000522136 ACY1Q03154 408 aa12.71□□□□□ -0.37
CLK4-210ENST00000522136 MAD2L1Q13257 205 aaPredicted RBP12.71□□□□□ -0.37
CLK4-210ENST00000522136 PTGR1Q14914 329 aa12.71□□□□□ -0.37
CLK4-210ENST00000522136 ISXQ2M1V0 245 aa12.71□□□□□ -0.37
CLK4-210ENST00000522136 SMU1Q2TAY7 513 aa12.71□□□□□ -0.37
CLK4-210ENST00000522136 TCTE1Q5JU00 501 aa12.71□□□□□ -0.37
CLK4-210ENST00000522136 MANEAQ5SRI9 462 aa12.71□□□□□ -0.37
CLK4-210ENST00000522136 HES3Q5TGS1 186 aa12.71□□□□□ -0.37
CLK4-210ENST00000522136 PDSS2Q86YH6 399 aa12.71□□□□□ -0.37
CLK4-210ENST00000522136 FITM2Q8N6M3 262 aa12.71□□□□□ -0.37
CLK4-210ENST00000522136 AGBL5Q8NDL9 886 aa12.71□□□□□ -0.37
CLK4-210ENST00000522136 CDC26Q8NHZ8 85 aa12.71□□□□□ -0.37
CLK4-210ENST00000522136 TEX37Q96LM6 180 aa12.71□□□□□ -0.37
CLK4-210ENST00000522136 QRFPRQ96P65 431 aa12.71□□□□□ -0.37
CLK4-210ENST00000522136 KCNC2Q96PR1 638 aa12.71□□□□□ -0.37
CLK4-210ENST00000522136 LRRC37BQ96QE4 947 aa12.71□□□□□ -0.37
CLK4-210ENST00000522136 TBCDQ9BTW9 1192 aa12.71□□□□□ -0.37
CLK4-210ENST00000522136 MYLK2Q9H1R3 596 aa12.71□□□□□ -0.37
CLK4-210ENST00000522136 TMED5Q9Y3A6 229 aa12.71□□□□□ -0.37
CLK4-210ENST00000522136 CROCCQ5TZA2 2017 aa12.71□□□□□ -0.38
CLK4-210ENST00000522136 GNG14A0A1W2PPG7 69 aa12.7□□□□□ -0.38
CLK4-210ENST00000522136 PMS2P1A4D2B8 440 aa12.7□□□□□ -0.38
CLK4-210ENST00000522136 URADA6NGE7 173 aa12.7□□□□□ -0.38
CLK4-210ENST00000522136 TXNDC9O14530 226 aa12.7□□□□□ -0.38
CLK4-210ENST00000522136 SLC30A4O14863 429 aa12.7□□□□□ -0.38
CLK4-210ENST00000522136 CCDC22O60826 627 aa12.7□□□□□ -0.38
CLK4-210ENST00000522136 CSO75390 466 aaKnown RBP12.7□□□□□ -0.38
CLK4-210ENST00000522136 DCTN3O75935 186 aa12.7□□□□□ -0.38
CLK4-210ENST00000522136 MYO1DO94832 1006 aa12.7□□□□□ -0.38
CLK4-210ENST00000522136 DKK1O94907 266 aa12.7□□□□□ -0.38
CLK4-210ENST00000522136 TIAF1O95411 115 aa12.7□□□□□ -0.38
CLK4-210ENST00000522136 IDO1P14902 403 aa12.7□□□□□ -0.38
CLK4-210ENST00000522136 ALOX12P18054 663 aa12.7□□□□□ -0.38
CLK4-210ENST00000522136 GPX3P22352 226 aa12.7□□□□□ -0.38
CLK4-210ENST00000522136 HIST1H1TP22492 207 aaPredicted RBP12.7□□□□□ -0.38
CLK4-210ENST00000522136 NOVA1P51513 510 aaKnown RBP12.7□□□□□ -0.38
CLK4-210ENST00000522136 UFM1P61960 85 aa12.7□□□□□ -0.38
CLK4-210ENST00000522136 RPS6KA2Q15349 733 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 1417 ms