RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.63■□□□□ 0.09
USP42-207ENST00000521713 CYS1Q717R9 158 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 CPXM2Q8N436 756 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 TMEM156Q8N614 296 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 OR56A1Q8NGH5 318 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 APOBEC3BQ9UH17 382 aaKnown RBP15.63■□□□□ 0.09
USP42-207ENST00000521713 A0A1W2PPW3 197 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 AXIN1O15169 862 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 INMTO95050 263 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 PLCZ1Q86YW0 608 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 OR4C6Q8NH72 309 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 CCDC107Q8WV48 283 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 SCRN2Q96FV2 425 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 SLC30A2Q9BRI3 323 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 MCOLN1Q9GZU1 580 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 PCDHB3Q9Y5E6 796 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 SEMA4FO95754 770 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 NPPAP01160 153 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 CHRM1P11229 460 aaPredicted RBP15.63■□□□□ 0.09
USP42-207ENST00000521713 MXD1Q05195 221 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 EPGNQ6UW88 154 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 RHEBL1Q8TAI7 183 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 EFHD2Q96C19 240 aaPredicted RBP15.63■□□□□ 0.09
USP42-207ENST00000521713 LRRC58Q96CX6 371 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 MYH3P11055 1940 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 K7ERQ8 282 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 APBB3O95704 486 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 PUS10Q3MIT2 529 aaKnown RBP15.63■□□□□ 0.09
USP42-207ENST00000521713 LIPJQ5W064 366 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 CXorf57Q6NSI4 855 aaKnown RBP15.63■□□□□ 0.09
USP42-207ENST00000521713 HDAC2Q92769 488 aaKnown RBP15.63■□□□□ 0.09
USP42-207ENST00000521713 CLSTN3Q9BQT9 956 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 SLC17A9Q9BYT1 436 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 DPAGT1Q9H3H5 408 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 SDHAF3Q9NRP4 125 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 TESMINQ9Y4I5 508 aa15.63■□□□□ 0.09
USP42-207ENST00000521713 A8MUA0 341 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 H3BQ06 376 aaPredicted RBP15.62■□□□□ 0.09
USP42-207ENST00000521713 SRCP12931 536 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 CREB5Q02930 508 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.62■□□□□ 0.093e-9■■□□□ 11.4
USP42-207ENST00000521713 XKR5Q6UX68 686 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 GALNT7Q86SF2 657 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 TMEM135Q86UB9 458 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 COL21A1Q96P44 957 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 PHOX2BQ99453 314 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 CGREF1Q99674 301 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 TRIM2Q9C040 744 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 OR51B5Q9H339 312 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 FAIMQ9NVQ4 179 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 GPR34Q9UPC5 381 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 SPINT3P49223 89 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 RPS13P62277 151 aaKnown RBP15.62■□□□□ 0.09
USP42-207ENST00000521713 EMX2Q04743 252 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 SUSD1Q6UWL2 747 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 CHCHD4Q8N4Q1 142 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 ELOA3DA6NLF2 546 aaPredicted RBP15.62■□□□□ 0.09
USP42-207ENST00000521713 CENPBD1B2RD01 187 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 DENRO43583 198 aaKnown RBP15.62■□□□□ 0.09
USP42-207ENST00000521713 DUX1O43812 170 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 DUOXA1Q1HG43 343 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 ELOA3BQ3SY89 546 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 ZCCHC12Q6PEW1 402 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 C3orf58Q8NDZ4 430 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 ELOA3Q8NG57 546 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 SNIP1Q8TAD8 396 aaKnown RBP15.62■□□□□ 0.09
USP42-207ENST00000521713 CNOT11Q9UKZ1 510 aaKnown RBP15.62■□□□□ 0.09
USP42-207ENST00000521713 POFUT2Q9Y2G5 429 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 ZBTB42B2RXF5 422 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 E7ESA3 106 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 HTRA2O43464 458 aaPredicted RBP15.62■□□□□ 0.09
USP42-207ENST00000521713 NOBOXO60393 691 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 HCN1O60741 890 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 B4GALT2O60909 372 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 ADRB3P13945 408 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 STOMP27105 288 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 ARF5P84085 180 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 OR4F3Q6IEY1 312 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 HTR3DQ70Z44 454 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 ZNF382Q96SR6 550 aa15.62■□□□□ 0.09
USP42-207ENST00000521713 RC3H2Q9HBD1 1191 aaKnown RBP15.62■□□□□ 0.09
USP42-207ENST00000521713 KANTRA0A1W2PQU2 76 aa15.61■□□□□ 0.09
USP42-207ENST00000521713 H7C2Y5 167 aa15.61■□□□□ 0.09
USP42-207ENST00000521713 IFI30P13284 250 aa15.61■□□□□ 0.09
USP42-207ENST00000521713 DECR1Q16698 335 aa15.61■□□□□ 0.09
USP42-207ENST00000521713 SLC36A4Q6YBV0 504 aa15.61■□□□□ 0.09
USP42-207ENST00000521713 ZIC5Q96T25 663 aa15.61■□□□□ 0.09
USP42-207ENST00000521713 KCNH6Q9H252 994 aa15.61■□□□□ 0.09
USP42-207ENST00000521713 LINC00597Q9H2U6 94 aa15.61■□□□□ 0.09
USP42-207ENST00000521713 ZBTB26Q9HCK0 441 aa15.61■□□□□ 0.09
USP42-207ENST00000521713 CSNK1G1Q9HCP0 422 aa15.61■□□□□ 0.09
USP42-207ENST00000521713 FZD4Q9ULV1 537 aa15.61■□□□□ 0.09
USP42-207ENST00000521713 PSAT1Q9Y617 370 aa15.61■□□□□ 0.09
USP42-207ENST00000521713 SYPP08247 313 aa15.61■□□□□ 0.09
USP42-207ENST00000521713 MSL3P1P0C860 447 aa15.61■□□□□ 0.09
USP42-207ENST00000521713 SLC7A9P82251 487 aa15.61■□□□□ 0.09
USP42-207ENST00000521713 NIPAL4Q0D2K0 466 aa15.61■□□□□ 0.09
USP42-207ENST00000521713 EFR3AQ14156 821 aa15.61■□□□□ 0.09
USP42-207ENST00000521713 FAM182AQ5T1J6 154 aa15.61■□□□□ 0.09
USP42-207ENST00000521713 TMEM198Q66K66 360 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms