RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 HMGXB3Q12766 1538 aa3.03□□□□□ -1.92
HMGN1P28-201ENST00000521340 GOLGA3Q08378 1498 aa3.03□□□□□ -1.93
HMGN1P28-201ENST00000521340 BAZ1BQ9UIG0 1483 aaKnown RBP3.03□□□□□ -1.93
HMGN1P28-201ENST00000521340 CEP162Q5TB80 1403 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 SCN5AQ14524 2016 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 ZMYM6O95789 1325 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 A0A087WUV0 522 aaPredicted RBP3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 A0A0U1RRA0 63 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 SYCE3A1L190 88 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 P2RY10O00398 339 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 TEX28O15482 410 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 ADAM12O43184 909 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 SYT7O43581 403 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 ECE2O60344 883 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 PRDM1O75626 825 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 KRT36O76013 467 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 PGK2P07205 417 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 CHRNGP07510 517 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 CETPP11597 493 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 AREGP15514 252 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 SELEP16581 610 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 SFNP31947 248 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 OR3A2P47893 321 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 LEPRP48357 1165 aaKnown RBP3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 CAMLGP49069 296 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 DNA2P51530 1060 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 CCR4P51679 360 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 HNRNPFP52597 415 aaKnown RBP3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 SRP54P61011 504 aaKnown RBP3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 GABPAQ06546 454 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 RBBP5Q15291 538 aaKnown RBP3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 ACKR1Q16570 336 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 ZNF74Q16587 644 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 STX1AQ16623 288 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 DUSP5Q16690 384 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 ZNF585BQ52M93 769 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 FAM76BQ5HYJ3 339 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 C12orf60Q5U649 245 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 CEACAM20Q6UY09 585 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 ERC1Q8IUD2 1116 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 APLFQ8IW19 511 aaPredicted RBP3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 TEX26Q8N6G2 289 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 MAB21L3Q8N8X9 362 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 SMYD1Q8NB12 490 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 MINDY2Q8NBR6 621 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 CCNYQ8ND76 341 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 TRPV3Q8NET8 790 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 UBTD2Q8WUN7 234 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 METTL21AQ8WXB1 218 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 DYRK2Q92630 601 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 PRCCQ92733 491 aaPredicted RBP3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 SLC35C1Q96A29 364 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 C16orf58Q96GQ5 468 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 LPAR4Q99677 370 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 SSX3Q99909 188 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 TEX13AQ9BXU3 409 aaPredicted RBP3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 ABCG8Q9H221 673 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 MMP28Q9H239 520 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 FAM212BQ9NTI7 297 aaPredicted RBP3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 ZCCHC3Q9NUD5 404 aaKnown RBP3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 HPF1Q9NWY4 346 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 RNF186Q9NXI6 227 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 CNOT2Q9NZN8 540 aaKnown RBP3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 ZNF624Q9P2J8 865 aaPredicted RBP3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 BLOC1S6Q9UL45 172 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 CCPG1Q9ULG6 757 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 NUDCQ9Y266 331 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 ITM2BQ9Y287 266 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 ERICH3Q5RHP9 1530 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 FGD5Q6ZNL6 1462 aa3.02□□□□□ -1.93
HMGN1P28-201ENST00000521340 CTTNBP2Q8WZ74 1663 aa3.01□□□□□ -1.93
HMGN1P28-201ENST00000521340 UMODL1Q5DID0 1318 aa3.01□□□□□ -1.93
HMGN1P28-201ENST00000521340 NPHP3Q7Z494 1330 aa3.01□□□□□ -1.93
HMGN1P28-201ENST00000521340 TRBV4-1A0A0J9YWV2 114 aa3.01□□□□□ -1.93
HMGN1P28-201ENST00000521340 CFAP73A6NFT4 308 aa3.01□□□□□ -1.93
HMGN1P28-201ENST00000521340 ERVV-2B6SEH9 535 aa3.01□□□□□ -1.93
HMGN1P28-201ENST00000521340 LMO7DNF2Z398 122 aa3.01□□□□□ -1.93
HMGN1P28-201ENST00000521340 TXNL1O43396 289 aa3.01□□□□□ -1.93
HMGN1P28-201ENST00000521340 TLX2O43763 284 aaPredicted RBP3.01□□□□□ -1.93
HMGN1P28-201ENST00000521340 SMPD2O60906 423 aa3.01□□□□□ -1.93
HMGN1P28-201ENST00000521340 ZFAND5O76080 213 aa3.01□□□□□ -1.93
HMGN1P28-201ENST00000521340 AP2A2O94973 939 aa3.01□□□□□ -1.93
HMGN1P28-201ENST00000521340 OR6B1O95007 311 aa3.01□□□□□ -1.93
HMGN1P28-201ENST00000521340 REC8O95072 547 aa3.01□□□□□ -1.93
HMGN1P28-201ENST00000521340 TRIM16O95361 564 aa3.01□□□□□ -1.93
HMGN1P28-201ENST00000521340 SEC24AO95486 1093 aa3.01□□□□□ -1.93
HMGN1P28-201ENST00000521340 TXNDC12O95881 172 aa3.01□□□□□ -1.93
HMGN1P28-201ENST00000521340 CLPTM1O96005 669 aa3.01□□□□□ -1.93
HMGN1P28-201ENST00000521340 MYOGP15173 224 aa3.01□□□□□ -1.93
HMGN1P28-201ENST00000521340 AMD1P17707 334 aa3.01□□□□□ -1.93
HMGN1P28-201ENST00000521340 DNAJB1P25685 340 aa3.01□□□□□ -1.93
HMGN1P28-201ENST00000521340 CCKARP32238 428 aa3.01□□□□□ -1.93
HMGN1P28-201ENST00000521340 SOX3P41225 446 aa3.01□□□□□ -1.93
HMGN1P28-201ENST00000521340 TNFRSF4P43489 277 aa3.01□□□□□ -1.93
HMGN1P28-201ENST00000521340 DVL1P1P54792 670 aaPredicted RBP3.01□□□□□ -1.93
HMGN1P28-201ENST00000521340 HUNKP57058 714 aa3.01□□□□□ -1.93
HMGN1P28-201ENST00000521340 MYL7Q01449 175 aa3.01□□□□□ -1.93
HMGN1P28-201ENST00000521340 SLC3A1Q07837 685 aa3.01□□□□□ -1.93
HMGN1P28-201ENST00000521340 ITPK1Q13572 414 aa3.01□□□□□ -1.93
HMGN1P28-201ENST00000521340 TRIM29Q14134 588 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms