RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 DFFBO76075 338 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 RECQL5O94762 991 aaPredicted RBP3.24□□□□□ -1.89
HDAC2-208ENST00000520746 DDHD2O94830 711 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 TIMP1P01033 207 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 PGK2P07205 417 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 FAM157CP0CG43 387 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 RNF224P0DH78 156 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 FDPSP14324 419 aaKnown RBP3.24□□□□□ -1.89
HDAC2-208ENST00000520746 DARSP14868 501 aaKnown RBP3.24□□□□□ -1.89
HDAC2-208ENST00000520746 PTAFRP25105 342 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 MAGEA11P43364 429 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 NR0B1P51843 470 aaKnown RBP3.24□□□□□ -1.89
HDAC2-208ENST00000520746 UBASH3AP57075 661 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 GCNT1Q02742 428 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 MZT1Q08AG7 82 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 HERC3Q15034 1050 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 PHKG1Q16816 387 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 SHROOM1Q2M3G4 852 aaPredicted RBP3.24□□□□□ -1.89
HDAC2-208ENST00000520746 HYAL4Q2M3T9 481 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 TMEM31Q5JXX7 168 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 LCE3AQ5TA76 89 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 SLFN11Q7Z7L1 901 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 IQUBQ8NA54 791 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 TMEM178AQ8NBL3 297 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 DDHD1Q8NEL9 900 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 TRPV1Q8NER1 839 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 OR13C3Q8NGS6 347 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 OR2T11Q8NH01 316 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 ACER1Q8TDN7 264 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 PROX1Q92786 737 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 FRAT1Q92837 279 aaPredicted RBP3.24□□□□□ -1.89
HDAC2-208ENST00000520746 EXT2Q93063 718 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 FAM71F1Q96KD3 344 aaPredicted RBP3.24□□□□□ -1.89
HDAC2-208ENST00000520746 PRAC1Q96KF2 57 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 GLT1D1Q96MS3 346 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 SLC2A11Q9BYW1 496 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 BARHL1Q9BZE3 327 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 API5Q9BZZ5 524 aaKnown RBP3.24□□□□□ -1.89
HDAC2-208ENST00000520746 OR2B2Q9GZK3 357 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 XAB2Q9HCS7 855 aaKnown RBP3.24□□□□□ -1.89
HDAC2-208ENST00000520746 PFDN4Q9NQP4 134 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 ANAPC5Q9UJX4 755 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 MRPS28Q9Y2Q9 187 aaKnown RBP3.24□□□□□ -1.89
HDAC2-208ENST00000520746 KCNK7Q9Y2U2 307 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 LIPGQ9Y5X9 500 aa3.24□□□□□ -1.89
HDAC2-208ENST00000520746 RBBP6Q7Z6E9 1792 aaKnown RBP3.24□□□□□ -1.89
HDAC2-208ENST00000520746 PSME4Q14997 1843 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 IGHV4-4A0A075B6R2 117 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 A0A1W2PPK0 400 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 KLF11O14901 512 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 EIF5BO60841 1220 aaKnown RBP3.23□□□□□ -1.89
HDAC2-208ENST00000520746 RPS6KA5O75582 802 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 SURF6O75683 361 aaKnown RBP3.23□□□□□ -1.89
HDAC2-208ENST00000520746 CNMDO75829 334 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 AP2A2O94973 939 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 SLC25A27O95847 323 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 GPIP06744 558 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 CYBAP13498 195 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 EPCAMP16422 314 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 ALDH4A1P30038 563 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 ACLYP53396 1101 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 CCL23P55773 120 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 PMP22Q01453 160 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 KLC1Q07866 573 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 GRB14Q14449 540 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 PSMD6Q15008 389 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 NPTX1Q15818 432 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 SLC25A53Q5H9E4 307 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 SLC35D3Q5M8T2 416 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 ERN2Q76MJ5 926 aaKnown RBP3.23□□□□□ -1.89
HDAC2-208ENST00000520746 KIRREL3Q8IZU9 778 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 CCAR2Q8N163 923 aaKnown RBP3.23□□□□□ -1.89
HDAC2-208ENST00000520746 NDUFAF2Q8N183 169 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 RYBPQ8N488 228 aaPredicted RBP3.23□□□□□ -1.89
HDAC2-208ENST00000520746 NIPA2Q8N8Q9 360 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 ZNF248Q8NDW4 579 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 KCNE4Q8WWG9 221 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 EGFL8Q99944 293 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 CCDC3Q9BQI4 270 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 KATNB1Q9BVA0 655 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 GTPBP2Q9BX10 602 aaKnown RBP3.23□□□□□ -1.89
HDAC2-208ENST00000520746 CRNKL1Q9BZJ0 848 aaKnown RBP3.23□□□□□ -1.89
HDAC2-208ENST00000520746 ZMYND12Q9H0C1 365 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 SHARPINQ9H0F6 387 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 FZD8Q9H461 694 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 TLE6Q9H808 572 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 Q9H8V8 135 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 DNAJC4Q9NNZ3 241 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 PPANQ9NQ55 473 aaKnown RBP3.23□□□□□ -1.89
HDAC2-208ENST00000520746 C2orf42Q9NWW7 574 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 TXNDC16Q9P2K2 825 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 GRID1Q9ULK0 1009 aa3.23□□□□□ -1.89
HDAC2-208ENST00000520746 SZT2Q5T011 3432 aa3.22□□□□□ -1.89
HDAC2-208ENST00000520746 MROH7Q68CQ1 1323 aa3.22□□□□□ -1.89
HDAC2-208ENST00000520746 ZNF646O15015 1829 aaPredicted RBP3.22□□□□□ -1.89
HDAC2-208ENST00000520746 A0A087WW49 117 aa3.22□□□□□ -1.89
HDAC2-208ENST00000520746 A0A0U1RQG5 324 aaPredicted RBP3.22□□□□□ -1.89
HDAC2-208ENST00000520746 CASTOR2A6NHX0 329 aa3.22□□□□□ -1.89
HDAC2-208ENST00000520746 EPHB6O15197 1021 aa3.22□□□□□ -1.89
HDAC2-208ENST00000520746 SNX3O60493 162 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms