RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 POLR2LP62875 67 aaKnown RBP2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 ZNF415Q09FC8 603 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 ITGA9Q13797 1035 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 SNCBQ16143 134 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 CDC37Q16543 378 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 PTGISQ16647 500 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 PHKG1Q16816 387 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 IMMTQ16891 758 aaKnown RBP2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 SGSM1Q2NKQ1 1148 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 PHLDA2Q53GA4 152 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 TTMPQ5BVD1 217 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 ANKRD20A8PQ5CZ79 823 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 SLC35D3Q5M8T2 416 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 CEP85LQ5SZL2 805 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 PSRC1Q6PGN9 363 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 KDM7AQ6ZMT4 941 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 ERN2Q76MJ5 926 aaKnown RBP2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 CCDC170Q8IYT3 715 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 EID3Q8N140 333 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 MREGQ8N565 214 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 WDSUB1Q8N9V3 476 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 SLC4A11Q8NBS3 891 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 CAMKVQ8NCB2 501 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 DDHD1Q8NEL9 900 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 OR11H4Q8NGC9 324 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 NCOA7Q8NI08 942 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 FAM81AQ8TBF8 368 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 MRGPRDQ8TDS7 321 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 DYRK2Q92630 601 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 P3H4Q92791 437 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 SLC35B4Q969S0 331 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 CCDC47Q96A33 483 aaKnown RBP2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 VPS33AQ96AX1 596 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 SPSB1Q96BD6 273 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 FAM20AQ96MK3 541 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 ANKRD27Q96NW4 1050 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 ALS2CR12Q96Q35 445 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 RAB3IPQ96QF0 476 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 ASCL2Q99929 193 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 PAIP2Q9BPZ3 127 aaKnown RBP2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 LZTS2Q9BRK4 669 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 NAA11Q9BSU3 229 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 CAPS2Q9BXY5 557 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 TSGA10Q9BZW7 698 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 OR2B2Q9GZK3 357 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 DDX43Q9NXZ2 648 aaKnown RBP2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 SLC12A6Q9UHW9 1150 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 MAN1B1Q9UKM7 699 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 C15orf41Q9Y2V0 281 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 LRRC42Q9Y546 428 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 CARMIL3Q8ND23 1372 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 ADAMTSL3P82987 1691 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 KIF1AQ12756 1690 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 LTN1O94822 1766 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 TCF20Q9UGU0 1960 aaKnown RBP2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 KAT6BQ8WYB5 2073 aa2.94□□□□□ -1.94
HMGB1P41-201ENST00000520234 MAP3K15Q6ZN16 1313 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 PCDH11XQ9BZA7 1347 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 TNS2Q63HR2 1409 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 NWD2Q9ULI1 1742 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 ALS2Q96Q42 1657 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 NID2Q14112 1375 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 A0A087WW49 117 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 A0A1B0GVL5 298 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 ZNF197O14709 1029 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 TRMUO75648 421 aaKnown RBP2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 FAM107AO95990 144 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 PAK4O96013 591 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 IGLV1-44P01699 117 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 HMBSP08397 361 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 QDPRP09417 244 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 UQCRFS1P1P0C7P4 283 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 GP1BBP13224 206 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 CEBPBP17676 345 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 JAK1P23458 1154 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 CCR10P46092 362 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 NT5C2P49902 561 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 ELF3P78545 371 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 DLK1P80370 383 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 IFFO1Q0D2I5 559 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 TAF10Q12962 218 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 CAMK2DQ13557 499 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 VEZF1Q14119 521 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 MTF1Q14872 753 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 PSMD6Q15008 389 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 NPTX1Q15818 432 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 HYAL4Q2M3T9 481 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 CCDC57Q2TAC2 916 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 HSP90B2PQ58FF3 399 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 KRBOX4Q5JUW0 171 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 HHATQ5VTY9 493 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 OR52E8Q6IFG1 317 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 CCDC73Q6ZRK6 1079 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 ADCK2Q7Z695 626 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 TLK2Q86UE8 772 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 RTN4RL2Q86UN3 420 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 KIRREL3Q8IZU9 778 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 LGI2Q8N0V4 545 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 MMGT1Q8N4V1 131 aa2.93□□□□□ -1.94
HMGB1P41-201ENST00000520234 NIPA2Q8N8Q9 360 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms