RNA–Protein interactions for RNA: ENST00000520140.5

VPS37A-206, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS37A, Length 2,102 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-206ENST00000520140 TXNDC9O14530 226 aa13.52□□□□□ -0.25
VPS37A-206ENST00000520140 DNAJB6O75190 326 aa13.52□□□□□ -0.25
VPS37A-206ENST00000520140 RBMS1P29558 406 aaKnown RBP13.52□□□□□ -0.25
VPS37A-206ENST00000520140 GTF2A1P52655 376 aaPredicted RBP13.52□□□□□ -0.25
VPS37A-206ENST00000520140 BTN3A2P78410 334 aa13.52□□□□□ -0.25
VPS37A-206ENST00000520140 MUM1Q2TAK8 710 aa13.52□□□□□ -0.25
VPS37A-206ENST00000520140 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.52□□□□□ -0.25
VPS37A-206ENST00000520140 TRIM40Q6P9F5 258 aa13.52□□□□□ -0.25
VPS37A-206ENST00000520140 CYB5D1Q6P9G0 228 aa13.52□□□□□ -0.25
VPS37A-206ENST00000520140 Q6ZSR9 355 aa13.52□□□□□ -0.25
VPS37A-206ENST00000520140 PDSS2Q86YH6 399 aa13.52□□□□□ -0.25
VPS37A-206ENST00000520140 ARHGEF39Q8N4T4 335 aa13.52□□□□□ -0.25
VPS37A-206ENST00000520140 AMER3Q8N944 861 aa13.52□□□□□ -0.25
VPS37A-206ENST00000520140 OR8K5Q8NH50 307 aa13.52□□□□□ -0.25
VPS37A-206ENST00000520140 FAM107BQ9H098 131 aa13.52□□□□□ -0.25
VPS37A-206ENST00000520140 NPHS2Q9NP85 383 aa13.52□□□□□ -0.25
VPS37A-206ENST00000520140 VPS29Q9UBQ0 182 aa13.52□□□□□ -0.25
VPS37A-206ENST00000520140 WASF3Q9UPY6 502 aa13.52□□□□□ -0.25
VPS37A-206ENST00000520140 TMEM184BQ9Y519 407 aaPredicted RBP13.52□□□□□ -0.25
VPS37A-206ENST00000520140 DMXL2Q8TDJ6 3036 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 BRINP1O60477 761 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 PEX11AO75192 247 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 STK17BO94768 372 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 SNUPNO95149 360 aaKnown RBP13.51□□□□□ -0.25
VPS37A-206ENST00000520140 ALOX12P18054 663 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 GSTM2P28161 218 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 SERPINB1P30740 379 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 SLC5A2P31639 672 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 CSTF3Q12996 717 aaKnown RBP13.51□□□□□ -0.25
VPS37A-206ENST00000520140 NR6A1Q15406 480 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 FAM214AQ32MH5 1076 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 ADPRMQ3LIE5 342 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 FAM199XQ6PEV8 388 aaPredicted RBP13.51□□□□□ -0.25
VPS37A-206ENST00000520140 ABHD13Q7L211 337 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 MAVSQ7Z434 540 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 UBE3DQ7Z6J8 389 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 PACS2Q86VP3 889 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 AFAP1L2Q8N4X5 818 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 GALNT6Q8NCL4 622 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 OR2L5Q8NG80 312 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 OR5T3Q8NGG3 340 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 MMABQ96EY8 250 aaPredicted RBP13.51□□□□□ -0.25
VPS37A-206ENST00000520140 APIPQ96GX9 242 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 FAR2Q96K12 515 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 CCDC134Q9H6E4 229 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 WDR55Q9H6Y2 383 aaPredicted RBP13.51□□□□□ -0.25
VPS37A-206ENST00000520140 BRF2Q9HAW0 419 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 DCTN4Q9UJW0 460 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 TSC22D4Q9Y3Q8 395 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 PCDHGA8Q9Y5G5 932 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 URADA6NGE7 173 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 HDAC3O15379 428 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 FOXS1O43638 330 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 CERS1P27544 350 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 EPHA3P29320 983 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 LSP1P33241 339 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 SSR2P43308 183 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 MAT1AQ00266 395 aaKnown RBP13.51□□□□□ -0.25
VPS37A-206ENST00000520140 SYT16Q17RD7 645 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 ABHD17CQ6PCB6 329 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 ZNF793Q6ZN11 406 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 TRIM46Q7Z4K8 759 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 BPHLQ86WA6 291 aaPredicted RBP13.51□□□□□ -0.25
VPS37A-206ENST00000520140 C1orf52Q8N6N3 182 aaKnown RBP13.51□□□□□ -0.25
VPS37A-206ENST00000520140 GAL3ST3Q96A11 431 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 TUBGCP3Q96CW5 907 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 SEC16BQ96JE7 1060 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 TEFMQ96QE5 360 aaKnown RBP13.51□□□□□ -0.25
VPS37A-206ENST00000520140 SERPINI1Q99574 410 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 CENPKQ9BS16 269 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 DDA1Q9BW61 102 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 EBPLQ9BY08 206 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 ANKHQ9HCJ1 492 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 LHX9Q9NQ69 397 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 PCDHB3Q9Y5E6 796 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 USH1CQ9Y6N9 552 aa13.51□□□□□ -0.25
VPS37A-206ENST00000520140 CACNA1AO00555 2505 aa13.5□□□□□ -0.25
VPS37A-206ENST00000520140 DIAPH2O60879 1101 aa13.5□□□□□ -0.25
VPS37A-206ENST00000520140 CPNE3O75131 537 aaKnown RBP13.5□□□□□ -0.25
VPS37A-206ENST00000520140 SEC22BO75396 215 aa13.5□□□□□ -0.25
VPS37A-206ENST00000520140 RDH16O75452 317 aa13.5□□□□□ -0.25
VPS37A-206ENST00000520140 EEDO75530 441 aaKnown RBP13.5□□□□□ -0.25
VPS37A-206ENST00000520140 KLHL18O94889 574 aa13.5□□□□□ -0.25
VPS37A-206ENST00000520140 ARSFP54793 590 aa13.5□□□□□ -0.25
VPS37A-206ENST00000520140 FOXL2P58012 376 aa13.5□□□□□ -0.25
VPS37A-206ENST00000520140 CUL3Q13618 768 aa13.5□□□□□ -0.25
VPS37A-206ENST00000520140 NDUFA9Q16795 377 aa13.5□□□□□ -0.25
VPS37A-206ENST00000520140 SLC9B1Q4ZJI4 515 aa13.5□□□□□ -0.25
VPS37A-206ENST00000520140 MANEAQ5SRI9 462 aa13.5□□□□□ -0.25
VPS37A-206ENST00000520140 LCN10Q6JVE6 187 aa13.5□□□□□ -0.25
VPS37A-206ENST00000520140 RHBDD2Q6NTF9 364 aa13.5□□□□□ -0.25
VPS37A-206ENST00000520140 ZFAND4Q86XD8 727 aa13.5□□□□□ -0.25
VPS37A-206ENST00000520140 GBP7Q8N8V2 638 aaPredicted RBP13.5□□□□□ -0.25
VPS37A-206ENST00000520140 RGMAQ96B86 450 aa13.5□□□□□ -0.25
VPS37A-206ENST00000520140 ZNF317Q96PQ6 595 aaPredicted RBP13.5□□□□□ -0.25
VPS37A-206ENST00000520140 KCNC2Q96PR1 638 aa13.5□□□□□ -0.25
VPS37A-206ENST00000520140 YIPF2Q9BWQ6 316 aa13.5□□□□□ -0.25
VPS37A-206ENST00000520140 COPS7BQ9H9Q2 264 aaPredicted RBP13.5□□□□□ -0.25
VPS37A-206ENST00000520140 HCN3Q9P1Z3 774 aa13.5□□□□□ -0.25
VPS37A-206ENST00000520140 SRPK3Q9UPE1 567 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms