RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 VAPAQ9P0L0 249 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 AASSQ9UDR5 926 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 PLAGL1Q9UM63 463 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 RNF6Q9Y252 685 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 CORINQ9Y5Q5 1042 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 AREL1O15033 823 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 PSIP1O75475 530 aaKnown RBP10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 HRH2P25021 359 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 HNF1BP35680 557 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 NUP62P37198 522 aaPredicted RBP10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 PNLIPRP1P54315 467 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 OR2B6P58173 313 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 CDK5R2Q13319 367 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 NFATC2Q13469 925 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 GTDC1Q4AE62 458 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 PSAPL1Q6NUJ1 521 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 LINC01465Q8N7H1 131 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 PROKR1Q8TCW9 393 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 C17orf50Q8WW18 174 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 RIPOR3Q96MK2 946 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 COQ7Q99807 217 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 PCBD2Q9H0N5 130 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 ARNT2Q9HBZ2 717 aa10.47□□□□□ -0.73
PCDHGA1-202ENST00000517417 A0A0U1RQS6 177 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 LEFTY1O75610 366 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 STC2O76061 302 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 ETV3P41162 512 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 CCR8P51685 355 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 AMZ1Q400G9 498 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 KIAA1614Q5VZ46 1190 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 LETMD1Q6P1Q0 360 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 CEP68Q76N32 757 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 LRRTM4Q86VH4 590 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 IQCHQ86VS3 1027 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 RAB43Q86YS6 212 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 COX18Q8N8Q8 333 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 OR4K1Q8NGD4 311 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 PEX13Q92968 403 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 IRF7Q92985 503 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 CNDP2Q96KP4 475 aaKnown RBP10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 DSN1Q9H410 356 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 TMEM138Q9NPI0 162 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 ERVK-11Q9UQG0 969 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 C4BPBP20851 252 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 GJA5P36382 358 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 TUBA1BP68363 451 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 RING1Q06587 406 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 SCARB2Q14108 478 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 NDUFA9Q16795 377 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 ZNF648Q5T619 568 aaPredicted RBP10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 TMIGD1Q6UXZ0 262 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 TUBA1AQ71U36 451 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 PTRH1Q86Y79 214 aaKnown RBP10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 SIX5Q8N196 739 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 GHDCQ8N2G8 530 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 FAM46DQ8NEK8 389 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 DNAJB8Q8NHS0 232 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 CLEC4MQ9H2X3 399 aaPredicted RBP10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 INTS6Q9UL03 887 aaKnown RBP10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 ACTL7AQ9Y615 435 aa10.46□□□□□ -0.73
PCDHGA1-202ENST00000517417 NUP205Q92621 2012 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 RHPN2P1A8MT19 583 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 PLK4O00444 970 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 SNX4O95219 450 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 TAS2R50P59544 299 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 PHC1P78364 1004 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 EMX1Q04741 257 aaPredicted RBP10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 ABHD18Q0P651 414 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 TMEM115Q12893 351 aaPredicted RBP10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 CLEC12AQ5QGZ9 265 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 ALKBH2Q6NS38 261 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 MBOAT1Q6ZNC8 495 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 USP30Q70CQ3 517 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 NUDT13Q86X67 352 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 PEX5LQ8IYB4 626 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 MUL1Q969V5 352 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 TBC1D17Q9HA65 648 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 TM9SF3Q9HD45 589 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 STON1Q9Y6Q2 735 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 FXYD1O00168 92 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 TEX28O15482 410 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 AQP9O43315 295 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 RFPL2O75678 378 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 KRT33AO76009 404 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 RB1P06400 928 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 CDKN1CP49918 316 aaPredicted RBP10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 GSTM4Q03013 218 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 LMAN2Q12907 356 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 QPRTQ15274 297 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 ALG11Q2TAA5 492 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 UBE2J2Q8N2K1 259 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 OR4E2Q8NGC2 313 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 DIRAS2Q96HU8 199 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 HSH2DQ96JZ2 352 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 MMP27Q9H306 513 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 EXO5Q9H790 373 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 TPT1P8Q9HAU6 139 aa10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 THUMPD1Q9NXG2 353 aaKnown RBP10.46□□□□□ -0.74
PCDHGA1-202ENST00000517417 FAM92AA1XBS5 289 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms