RNA–Protein interactions for RNA: ENST00000516699.1

RNU4ATAC3P-201, Transcript of RNA, U4atac small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU4ATAC3P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC3P-201ENST00000516699 ARAFP10398 606 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 PRKAR1AP10644 381 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 DBTP11182 482 aaKnown RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ACADMP11310 421 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 CKMT1AP12532 417 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 OSMP13725 252 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ITGB6P18564 788 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ATF6P18850 670 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 PRKACGP22612 351 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 UQCRC2P22695 453 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 GADD45AP24522 165 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 PTPN6P29350 595 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 HOXA9P31269 272 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 VIPR1P32241 457 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 CA5AP35218 305 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 TALDO1P37837 337 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 CSKP41240 450 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 CASP3P42574 277 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 IL12RB1P42701 662 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 MAP2K4P45985 399 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 XCR1P46094 333 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 RGRP47804 291 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 MASP1P48740 699 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 SLC9A3P48764 834 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 SPINT3P49223 89 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 DGKGP49619 791 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 PRLHRP49683 370 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 CDKN1CP49918 316 aaPredicted RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ZNF157P51786 506 aaPredicted RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 AFF1P51825 1210 aaKnown RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 SMSP52788 366 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 HMGA2P52926 109 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ARFIP1P53367 373 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ACLYP53396 1101 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 MAPK10P53779 464 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 IST1P53990 364 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 CDH12P55289 794 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ARPC4P59998 168 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 DSTNP60981 165 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 LSM3P62310 102 aaKnown RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 TRA2BP62995 288 aaKnown RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 PPP3R1P63098 170 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 KCNJ10P78508 379 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 SLC7A9P82251 487 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 PLIN5Q00G26 463 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 BDH1Q02338 343 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 UBE3AQ05086 875 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 RAB40BQ12829 278 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ASAH1Q13510 395 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 PDE7AQ13946 482 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 IHHQ14623 411 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 IRF3Q14653 427 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 PTPRCAPQ14761 206 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ARHGAP19Q14CB8 494 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 MLC1Q15049 377 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 QPRTQ15274 297 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 SPHARQ15513 63 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 MED22Q15528 200 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 TRAM1Q15629 374 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 CHRNA6Q15825 494 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 KCNJ8Q15842 424 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 NKG7Q16617 165 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 OCLNQ16625 522 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 CCL14Q16627 93 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 UGT8Q16880 541 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 TRIM71Q2Q1W2 868 aaKnown RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 FBXO48Q5FWF7 155 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 DCST1Q5T197 706 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 LCN1P1Q5VSP4 162 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 SDHAF4Q5VUM1 108 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 TMEM236Q5W0B7 351 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 TRIQKQ629K1 86 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 PDE12Q6L8Q7 609 aaKnown RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 GPR153Q6NV75 609 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 C22orf39Q6P5X5 142 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 C19orf48Q6RUI8 117 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 PLET1Q6UQ28 207 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 CCBE1Q6UXH8 406 aaPredicted RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 TMC5Q6UXY8 1006 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 CD300LDQ6UXZ3 194 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 RNF19BQ6ZMZ0 732 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 Q6ZNB5 142 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 CCDC149Q6ZUS6 474 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 HTR3DQ70Z44 454 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ZNF767PQ75MW2 155 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 CEP68Q76N32 757 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ZNF765Q7L2R6 523 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 NANOGNBQ7Z5D8 188 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 CCDC190Q86UF4 302 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 THOC6Q86W42 341 aaKnown RBP3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ANKRD46Q86W74 232 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 PTOV1Q86YD1 416 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 ZNF280BQ86YH2 543 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 RASAL3Q86YV0 1011 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 PLCZ1Q86YW0 608 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 PHACTR4Q8IZ21 702 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 SLC22A15Q8IZD6 547 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 OR8H2Q8N162 312 aa3.24□□□□□ -1.89
RNU4ATAC3P-201ENST00000516699 SLC43A2Q8N370 569 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms