RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 STN1Q9H668 368 aaKnown RBP2.92□□□□□ -1.94
SCARNA13-201ENST00000516672 CCDC134Q9H6E4 229 aa2.92□□□□□ -1.94
SCARNA13-201ENST00000516672 PDFQ9HBH1 243 aa2.92□□□□□ -1.94
SCARNA13-201ENST00000516672 HOMER3Q9NSC5 361 aa2.92□□□□□ -1.94
SCARNA13-201ENST00000516672 KCTD5Q9NXV2 234 aa2.92□□□□□ -1.94
SCARNA13-201ENST00000516672 MPP6Q9NZW5 540 aa2.92□□□□□ -1.94
SCARNA13-201ENST00000516672 JKAMPQ9P055 326 aa2.92□□□□□ -1.94
SCARNA13-201ENST00000516672 EPHA6Q9UF33 1036 aa2.92□□□□□ -1.94
SCARNA13-201ENST00000516672 ZDHHC2Q9UIJ5 367 aa2.92□□□□□ -1.94
SCARNA13-201ENST00000516672 AMFRQ9UKV5 643 aa2.92□□□□□ -1.94
SCARNA13-201ENST00000516672 RPL26L1Q9UNX3 145 aaKnown RBP2.92□□□□□ -1.94
SCARNA13-201ENST00000516672 TSC22D4Q9Y3Q8 395 aa2.92□□□□□ -1.94
SCARNA13-201ENST00000516672 SPEF1Q9Y4P9 236 aa2.92□□□□□ -1.94
SCARNA13-201ENST00000516672 DNAH5Q8TE73 4624 aa2.92□□□□□ -1.94
SCARNA13-201ENST00000516672 hCG_1818297A0A087WSY0 165 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 TSPAN11A1L157 253 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 CLPSL1A2RUU4 121 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 LRRD1A4D1F6 860 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 GMNCA6NCL1 334 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 VWC2LB2RUY7 222 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 E7EVH7 732 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 H0YHG0 523 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 APOC4-APOC2K7ER74 178 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 APOL1O14791 398 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 LIN7AO14910 233 aaPredicted RBP2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 SMAD6O43541 496 aaKnown RBP2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 WDR1O75083 606 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 ZNF821O75541 412 aaPredicted RBP2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 SEC14L2O76054 403 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 IGSF6O95976 241 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 NGFP01138 241 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 APOC2P02655 101 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 LINGO3P0C6S8 592 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 IGLL1P15814 213 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 TCF4P15884 667 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 CA4P22748 312 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 AMPD1P23109 780 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 PTPN6P29350 595 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 SERPINA4P29622 427 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 SSTR4P31391 388 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 TRIM23P36406 574 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 ACVRL1P37023 503 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 RFC3P40938 356 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 CAPZBP47756 277 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 ARL4DP49703 201 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 ST13P50502 369 aaKnown RBP2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 CCNG1P51959 295 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 RAG2P55895 527 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 RHOAP61586 193 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 PPP1CAP62136 330 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 IFI35P80217 286 aaPredicted RBP2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 HSD11B2P80365 405 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 ARF5P84085 180 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 RELBQ01201 579 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 GUCY2DQ02846 1103 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 ADCY2Q08462 1091 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 PPIDQ08752 370 aaKnown RBP2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 IFFO1Q0D2I5 559 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 DBPQ10586 325 aaPredicted RBP2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 BAMBIQ13145 260 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 CUL1Q13616 776 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 BLMHQ13867 455 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 ITIH4Q14624 930 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 SLC9A5Q14940 896 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 RPS6KA1Q15418 735 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 CYTH1Q15438 398 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 OR1C1Q15619 314 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 ATP13A4Q4VNC1 1196 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 SYTL3Q4VX76 610 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 ZNF805Q5CZA5 627 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 LRRC73Q5JTD7 316 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 ZNF362Q5T0B9 420 aaPredicted RBP2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 RNF187Q5TA31 235 aaPredicted RBP2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 MARC1Q5VT66 337 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 NCBP2-AS2Q69YL0 99 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 TXNRD3NBQ6F5E7 133 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 CCDC70Q6NSX1 233 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 IRGCQ6NXR0 463 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 C22orf39Q6P5X5 142 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 DRICH1Q6PGQ1 229 aaPredicted RBP2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 IYDQ6PHW0 289 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 BRAT1Q6PJG6 821 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 LINC00336Q6ZUF6 198 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 CCDC121Q6ZUS5 278 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 TMC3Q7Z5M5 1100 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 SLC9B2Q86UD5 537 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 CIR1Q86X95 450 aaPredicted RBP2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 KMT5CQ86Y97 462 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 KIRREL3Q8IZU9 778 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 NDUFAF2Q8N183 169 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 RASGEF1CQ8N431 466 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 ATPAF2Q8N5M1 289 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 SLC25A41Q8N5S1 370 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 PQLC3Q8N755 202 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 OR7D4Q8NG98 312 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 OR52K2Q8NGK3 314 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 RNF217Q8TC41 542 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 DTX3LQ8TDB6 740 aa2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.91□□□□□ -1.94
SCARNA13-201ENST00000516672 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms