RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 R4GN57 208 aa-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 ZFYVE26Q68DK2 2539 aa-1.55□□□□□ -2.66
RNU6-539P-201ENST00000516665 UBR5O95071 2799 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 LTBP2Q14767 1821 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 IGLV3-12A0A075B6K2 115 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 PPIAL4EA0A075B759 164 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 PPIAL4CA0A0B4J2A2 164 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 IGHV3-64DA0A0J9YX35 117 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 LOC390937A0A1W2PQ73 354 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 NKX2-6A6NCS4 301 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 PPIAL4DF5H284 164 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 RTCAO00442 366 aaKnown RBP-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 WDR46O15213 610 aaKnown RBP-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 RRP8O43159 456 aaKnown RBP-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 NUDT21O43809 227 aaKnown RBP-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 SPAG7O75391 227 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 RECQL5O94762 991 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 CTDNEP1O95476 244 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 HRGP04196 525 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 ATP1B1P05026 303 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 CT47B1P0C2W7 299 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 CCDC166P0CW27 439 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 PPIAL4FP0DN26 164 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 LAMP1P11279 417 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 NPR2P20594 1047 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 AADACP22760 399 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 FCGR2BP31994 310 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 FCGR2CP31995 323 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 NRIP1P48552 1158 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 RBM5P52756 815 aaKnown RBP eCLIP-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 MYL7Q01449 175 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 SGCGQ13326 291 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 TRIM29Q14134 588 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 FGFBP1Q14512 234 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 DRAP1Q14919 205 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 NAA25Q14CX7 972 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 NTRK2Q16620 822 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 CCDC57Q2TAC2 916 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 PAGE2BQ5JRK9 111 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 SLC22A10Q63ZE4 541 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 Q6ZRN7 208 aaPredicted RBP-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 RINLQ6ZS11 566 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 GID4Q8IVV7 300 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 GPR65Q8IYL9 337 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 FAM89BQ8N5H3 189 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 C20orf203Q8NBC4 194 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 IL17REQ8NFR9 667 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 ZNF671Q8TAW3 534 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 RAET1EQ8TD07 263 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 ZNF566Q969W8 418 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 DNAJC1Q96KC8 554 aaKnown RBP-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 OR10C1Q96KK4 312 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 TNFRSF13CQ96RJ3 184 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 CCDC3Q9BQI4 270 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 PABPC3Q9H361 631 aaKnown RBP-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 MIEF1Q9NQG6 463 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 ZNF225Q9UK10 706 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 RNF24Q9Y225 148 aa-1.56□□□□□ -2.66
RNU6-539P-201ENST00000516665 LAMB4A4D0S4 1761 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 OTOGQ6ZRI0 2925 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 HYKKA2RU49 373 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 MAP2K7O14733 419 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 INPP4BO15327 924 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 SOCS1O15524 211 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 WDPCPO95876 746 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 ZBED1O96006 694 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 INSP01308 110 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 HSPA8P11142 646 aaKnown RBP-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 IL7RP16871 459 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 C4BPBP20851 252 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 SLC6A6P31641 620 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 AP2B1P63010 937 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 CTAG1AP78358 180 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 CD47Q08722 323 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 ZNF415Q09FC8 603 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 NAB2Q15742 525 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 MEP1AQ16819 746 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 GPR33Q49SQ1 333 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 TXNRD3NBQ6F5E7 133 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 TPRG1Q6ZUI0 275 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 CFAP206Q8IYR0 622 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 Q8N9G6 341 aaPredicted RBP-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 C11orf65Q8NCR3 313 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 ETNPPLQ8TBG4 499 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 DCUN1D4Q92564 292 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 SH3KBP1Q96B97 665 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 PTERQ96BW5 349 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 NXPE2Q96DL1 559 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 HOOK2Q96ED9 719 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 HARBI1Q96MB7 349 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 RCHY1Q96PM5 261 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 TM2D3Q9BRN9 247 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 NUP62CLQ9H1M0 184 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 STN1Q9H668 368 aaKnown RBP-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 WRAP73Q9P2S5 460 aaPredicted RBP-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 GJD2Q9UKL4 321 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 PRDM4Q9UKN5 801 aa-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 ZHX1Q9UKY1 873 aaPredicted RBP-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 AAR2Q9Y312 384 aaKnown RBP-1.57□□□□□ -2.66
RNU6-539P-201ENST00000516665 FBXO7Q9Y3I1 522 aa-1.57□□□□□ -2.66
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms