RNA–Protein interactions for RNA: ENST00000516601.1

RNU5B-3P-201, Transcript of RNA, U5B small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU5B-3P, Length 115 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU5B-3P-201ENST00000516601 ZNF354BQ96LW1 612 aa2.36□□□□□ -2.03
RNU5B-3P-201ENST00000516601 C16orf45Q96MC5 204 aaPredicted RBP2.36□□□□□ -2.03
RNU5B-3P-201ENST00000516601 NACAP1Q9BZK3 213 aa2.36□□□□□ -2.03
RNU5B-3P-201ENST00000516601 TSPYL1Q9H0U9 437 aa2.36□□□□□ -2.03
RNU5B-3P-201ENST00000516601 DPEP2Q9H4A9 486 aa2.36□□□□□ -2.03
RNU5B-3P-201ENST00000516601 C6orf106Q9H6K1 298 aaPredicted RBP2.36□□□□□ -2.03
RNU5B-3P-201ENST00000516601 CHST11Q9NPF2 352 aa2.36□□□□□ -2.03
RNU5B-3P-201ENST00000516601 PRMT8Q9NR22 394 aaPredicted RBP2.36□□□□□ -2.03
RNU5B-3P-201ENST00000516601 ZFP57Q9NU63 452 aa2.36□□□□□ -2.03
RNU5B-3P-201ENST00000516601 HPF1Q9NWY4 346 aa2.36□□□□□ -2.03
RNU5B-3P-201ENST00000516601 TAS2R3Q9NYW6 316 aa2.36□□□□□ -2.03
RNU5B-3P-201ENST00000516601 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.36□□□□□ -2.03
RNU5B-3P-201ENST00000516601 TRIM10Q9UDY6 481 aa2.36□□□□□ -2.03
RNU5B-3P-201ENST00000516601 FAM153AQ9UHL3 310 aa2.36□□□□□ -2.03
RNU5B-3P-201ENST00000516601 SLC12A6Q9UHW9 1150 aa2.36□□□□□ -2.03
RNU5B-3P-201ENST00000516601 SH3BGRL2Q9UJC5 107 aa2.36□□□□□ -2.03
RNU5B-3P-201ENST00000516601 CCPG1Q9ULG6 757 aa2.36□□□□□ -2.03
RNU5B-3P-201ENST00000516601 PPP2R2CQ9Y2T4 447 aa2.36□□□□□ -2.03
RNU5B-3P-201ENST00000516601 PCDHGB1Q9Y5G3 927 aa2.36□□□□□ -2.03
RNU5B-3P-201ENST00000516601 FAM205AQ6ZU69 1335 aa2.36□□□□□ -2.03
RNU5B-3P-201ENST00000516601 TRBV2A0A0J9YWF9 115 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 A0A0U1RRA0 63 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 FAM149AA5PLN7 773 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 ERI2A8K979 691 aaKnown RBP2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 KPNA7A9QM74 516 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 C2CD4DB7Z1M9 353 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 SLC28A1O00337 649 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 EPHB6O15197 1021 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 ATP6V1G1O75348 118 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 CDK2AP2O75956 126 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 CAVIN2O95810 425 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 PDGFBP01127 241 aaPredicted RBP2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 IFNB1P01574 187 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 IGHDP01880 384 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 CRYAAP02489 173 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 RAF1P04049 648 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 GPIP06744 558 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 PGK2P07205 417 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 CD48P09326 243 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 FAM157CP0CG43 387 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 FUT1P19526 365 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 RBMS1P29558 406 aaKnown RBP2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 CHRNA3P32297 505 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 OR1D2P34982 312 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 GPC3P51654 580 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 CLCN4P51793 760 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 HERV-K104P61576 105 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 HERV-K104P63124 156 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 RPP38P78345 283 aaKnown RBP2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 HTD2P86397 168 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 PPP1R8Q12972 351 aaKnown RBP2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 SPP2Q13103 211 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 GPR17Q13304 367 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 GAMTQ14353 236 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 SPHARQ15513 63 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 PTPN14Q15678 1187 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 INAQ16352 499 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 DUSP5Q16690 384 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 TTC31Q49AM3 519 aaPredicted RBP2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 CCDC40Q4G0X9 1142 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 CMPK2Q5EBM0 449 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 XKR6Q5GH73 641 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 LDLRAP1Q5SW96 308 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 RBMS3Q6XE24 437 aaKnown RBP2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 MACC1Q6ZN28 852 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 TMEM26Q6ZUK4 368 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 TRMT1LQ7Z2T5 733 aaKnown RBP2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 TRPT1Q86TN4 253 aaKnown RBP2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 NFE4Q86UQ8 179 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 EXOC3L1Q86VI1 746 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 CCDC60Q8IWA6 550 aaPredicted RBP2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 NAGSQ8N159 534 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 TCEANCQ8N8B7 351 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 SLC37A3Q8NCC5 494 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 TRPV3Q8NET8 790 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 ANKRD20A12PQ8NF67 263 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 OR1L3Q8NH93 324 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 SPATA18Q8TC71 538 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 APOBEC4Q8WW27 367 aaKnown RBP2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 SLC35C1Q96A29 364 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 SLCO4A1Q96BD0 722 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 ULK4Q96C45 1275 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 BPIFA2Q96DR5 249 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 EEF2KMTQ96G04 330 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 CXorf58Q96LI9 332 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 SAMD8Q96LT4 415 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 C10orf90Q96M02 699 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 NSMCE2Q96MF7 247 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 TSGA13Q96PP4 275 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 ASCL2Q99929 193 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 FAM213AQ9BRX8 229 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 PANK2Q9BZ23 570 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 DDX47Q9H0S4 455 aaKnown RBP2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 THAP2Q9H0W7 228 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 RWDD1Q9H446 243 aaPredicted RBP2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 ATP13A3Q9H7F0 1226 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 SIX2Q9NPC8 291 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 NGBQ9NPG2 151 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 PIGVQ9NUD9 493 aa2.35□□□□□ -2.03
RNU5B-3P-201ENST00000516601 DDX28Q9NUL7 540 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms