RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 TMEM251Q8N6I4 163 aa9.75□□□□□ -0.85
CLDND1-231ENST00000515620 OTUD6BQ8N6M0 293 aa9.75□□□□□ -0.85
CLDND1-231ENST00000515620 APCDD1LQ8NCL9 501 aa9.75□□□□□ -0.85
CLDND1-231ENST00000515620 FBXO15Q8NCQ5 510 aaPredicted RBP9.75□□□□□ -0.85
CLDND1-231ENST00000515620 CCDC42Q96M95 316 aa9.75□□□□□ -0.85
CLDND1-231ENST00000515620 CHP1Q99653 195 aa9.75□□□□□ -0.85
CLDND1-231ENST00000515620 YIPF4Q9BSR8 244 aa9.75□□□□□ -0.85
CLDND1-231ENST00000515620 EXO5Q9H790 373 aa9.75□□□□□ -0.85
CLDND1-231ENST00000515620 NHEJ1Q9H9Q4 299 aaPredicted RBP9.75□□□□□ -0.85
CLDND1-231ENST00000515620 TMEM184CQ9NVA4 438 aa9.75□□□□□ -0.85
CLDND1-231ENST00000515620 ZNHIT6Q9NWK9 470 aaKnown RBP9.75□□□□□ -0.85
CLDND1-231ENST00000515620 HPF1Q9NWY4 346 aa9.75□□□□□ -0.85
CLDND1-231ENST00000515620 MTRF1LQ9UGC7 380 aaKnown RBP9.75□□□□□ -0.85
CLDND1-231ENST00000515620 RIMKLBQ9ULI2 386 aa9.75□□□□□ -0.85
CLDND1-231ENST00000515620 TCAF1Q9Y4C2 921 aa9.75□□□□□ -0.85
CLDND1-231ENST00000515620 PCDHA3Q9Y5H8 950 aa9.75□□□□□ -0.85
CLDND1-231ENST00000515620 SCN3AQ9NY46 2000 aa9.75□□□□□ -0.85
CLDND1-231ENST00000515620 A0A1B0GVC2 190 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 ATP6AP2A0A1C7CYW4 349 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 TCRBV16S1A1N1A0A5B0 115 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 TRIM64A6NGJ6 449 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 TRIM64BA6NI03 449 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 CHST10O43529 356 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 SMPD2O60906 423 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 ATP6AP2O75787 350 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 MYO1DO94832 1006 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 OR6B1O95007 311 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 B3GALT4O96024 378 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 SLC35G6P0C7Q6 338 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 ADRA1DP25100 572 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 FMO4P31512 558 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 PTPN7P35236 360 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 GRIA1P42261 906 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 CLCN2P51788 898 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 KCNJ11Q14654 390 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 HERC3Q15034 1050 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 FBXL19-AS1Q494R0 122 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 DEFB134Q4QY38 66 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 C11orf63Q6NUN7 778 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 AADACL2Q6P093 401 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 IL20RBQ6UXL0 311 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 C16orf47Q6ZP98 133 aaPredicted RBP9.74□□□□□ -0.85
CLDND1-231ENST00000515620 QSOX2Q6ZRP7 698 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 KIAA0408Q6ZU52 694 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 PHC2Q8IXK0 858 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 LRRC56Q8IYG6 542 aaPredicted RBP9.74□□□□□ -0.85
CLDND1-231ENST00000515620 NAXEQ8NCW5 288 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 PPHLN1Q8NEY8 458 aaKnown RBP9.74□□□□□ -0.85
CLDND1-231ENST00000515620 B3GNT7Q8NFL0 401 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 OR8K1Q8NGG5 319 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 LINC01560Q8TB33 94 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 SLC13A3Q8WWT9 602 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 SREK1Q8WXA9 508 aaKnown RBP9.74□□□□□ -0.85
CLDND1-231ENST00000515620 ASB15Q8WXK1 588 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 ZNF592Q92610 1267 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 SARAFQ96BY9 339 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 TM4SF19Q96DZ7 209 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 THAP11Q96EK4 314 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 BIRC8Q96P09 236 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 PANX2Q96RD6 677 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 BDH2Q9BUT1 245 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 LDAHQ9H6V9 325 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 TRMT1Q9NXH9 659 aaKnown RBP9.74□□□□□ -0.85
CLDND1-231ENST00000515620 GALPQ9UBC7 116 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 ZNF223Q9UK11 482 aaPredicted RBP9.74□□□□□ -0.85
CLDND1-231ENST00000515620 INTUQ9ULD6 942 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 SH2B3Q9UQQ2 575 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 EFR3BQ9Y2G0 817 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 SLC22A7Q9Y694 548 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 ZANQ9Y493 2812 aa9.74□□□□□ -0.85
CLDND1-231ENST00000515620 IGKV3D-11A0A0A0MRZ8 115 aa9.73□□□□□ -0.85
CLDND1-231ENST00000515620 A0A1W2PPR1 153 aa9.73□□□□□ -0.85
CLDND1-231ENST00000515620 PRKNO60260 465 aaPredicted RBP9.73□□□□□ -0.85
CLDND1-231ENST00000515620 SUSD5O60279 629 aa9.73□□□□□ -0.85
CLDND1-231ENST00000515620 GALR3O60755 368 aaPredicted RBP9.73□□□□□ -0.85
CLDND1-231ENST00000515620 OR2J2O76002 312 aa9.73□□□□□ -0.85
CLDND1-231ENST00000515620 TJP3O95049 919 aa9.73□□□□□ -0.85
CLDND1-231ENST00000515620 GABRA1P14867 456 aa9.73□□□□□ -0.85
CLDND1-231ENST00000515620 CHRM3P20309 590 aa9.73□□□□□ -0.85
CLDND1-231ENST00000515620 ENDOUP21128 410 aaKnown RBP9.73□□□□□ -0.85
CLDND1-231ENST00000515620 HRH2P25021 359 aa9.73□□□□□ -0.85
CLDND1-231ENST00000515620 CTNNA1P35221 906 aaKnown RBP9.73□□□□□ -0.85
CLDND1-231ENST00000515620 HADHBP55084 474 aaKnown RBP9.73□□□□□ -0.85
CLDND1-231ENST00000515620 WNT3P56703 355 aa9.73□□□□□ -0.85
CLDND1-231ENST00000515620 TBPL1P62380 186 aa9.73□□□□□ -0.85
CLDND1-231ENST00000515620 TPM4P67936 248 aa9.73□□□□□ -0.85
CLDND1-231ENST00000515620 MEF2AQ02078 507 aaPredicted RBP9.73□□□□□ -0.85
CLDND1-231ENST00000515620 CBLBQ13191 982 aa9.73□□□□□ -0.85
CLDND1-231ENST00000515620 CAPN13Q6MZZ7 669 aaPredicted RBP9.73□□□□□ -0.85
CLDND1-231ENST00000515620 SEM1Q6ZVN7 128 aa9.73□□□□□ -0.85
CLDND1-231ENST00000515620 LUZP1Q86V48 1076 aa9.73□□□□□ -0.85
CLDND1-231ENST00000515620 REXO1L1PQ8IX06 675 aa9.73□□□□□ -0.85
CLDND1-231ENST00000515620 GPALPP1Q8IXQ4 340 aa9.73□□□□□ -0.85
CLDND1-231ENST00000515620 MPP5Q8N3R9 675 aa9.73□□□□□ -0.85
CLDND1-231ENST00000515620 AFAP1L2Q8N4X5 818 aa9.73□□□□□ -0.85
CLDND1-231ENST00000515620 ZNF740Q8NDX6 193 aa9.73□□□□□ -0.85
CLDND1-231ENST00000515620 CAPZA3Q96KX2 299 aa9.73□□□□□ -0.85
CLDND1-231ENST00000515620 FAM173AQ9BQD7 235 aa9.73□□□□□ -0.85
CLDND1-231ENST00000515620 LIN28AQ9H9Z2 209 aaKnown RBP9.73□□□□□ -0.85
CLDND1-231ENST00000515620 IL1RL2Q9HB29 575 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms