RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 CXorf56Q9H5V9 222 aa10.88□□□□□ -0.67
SMAD5-210ENST00000515005 KLHL28Q9NXS3 571 aa10.88□□□□□ -0.67
SMAD5-210ENST00000515005 UTP6Q9NYH9 597 aaKnown RBP10.88□□□□□ -0.67
SMAD5-210ENST00000515005 NAALAD2Q9Y3Q0 740 aa10.88□□□□□ -0.67
SMAD5-210ENST00000515005 MED12LQ86YW9 2145 aa10.87□□□□□ -0.67
SMAD5-210ENST00000515005 ERN1O75460 977 aaKnown RBP10.87□□□□□ -0.67
SMAD5-210ENST00000515005 ANXA9O76027 345 aa10.87□□□□□ -0.67
SMAD5-210ENST00000515005 MAOAP21397 527 aa10.87□□□□□ -0.67
SMAD5-210ENST00000515005 CRYGSP22914 178 aa10.87□□□□□ -0.67
SMAD5-210ENST00000515005 AOAHP28039 575 aa10.87□□□□□ -0.67
SMAD5-210ENST00000515005 LOXP28300 417 aaPredicted RBP10.87□□□□□ -0.67
SMAD5-210ENST00000515005 MC3RP41968 323 aa10.87□□□□□ -0.67
SMAD5-210ENST00000515005 TRPC1P48995 793 aa10.87□□□□□ -0.67
SMAD5-210ENST00000515005 KLHL30Q0D2K2 578 aa10.87□□□□□ -0.67
SMAD5-210ENST00000515005 FOXF2Q12947 444 aa10.87□□□□□ -0.67
SMAD5-210ENST00000515005 C12orf54Q6X4T0 127 aa10.87□□□□□ -0.67
SMAD5-210ENST00000515005 SLC26A11Q86WA9 606 aa10.87□□□□□ -0.67
SMAD5-210ENST00000515005 ZNF441Q8N8Z8 693 aa10.87□□□□□ -0.67
SMAD5-210ENST00000515005 B3GNT7Q8NFL0 401 aa10.87□□□□□ -0.67
SMAD5-210ENST00000515005 OR6P1Q8NGX9 317 aa10.87□□□□□ -0.67
SMAD5-210ENST00000515005 NEIL3Q8TAT5 605 aa10.87□□□□□ -0.67
SMAD5-210ENST00000515005 SLC22A8Q8TCC7 542 aa10.87□□□□□ -0.67
SMAD5-210ENST00000515005 SKA2Q8WVK7 121 aaPredicted RBP10.87□□□□□ -0.67
SMAD5-210ENST00000515005 SREK1Q8WXA9 508 aaKnown RBP10.87□□□□□ -0.67
SMAD5-210ENST00000515005 SMPDL3AQ92484 453 aa10.87□□□□□ -0.67
SMAD5-210ENST00000515005 LCORQ96JN0 433 aaPredicted RBP10.87□□□□□ -0.67
SMAD5-210ENST00000515005 SCYL1Q96KG9 808 aa10.87□□□□□ -0.67
SMAD5-210ENST00000515005 KCNK17Q96T54 332 aa10.87□□□□□ -0.67
SMAD5-210ENST00000515005 VAT1Q99536 393 aa10.87□□□□□ -0.67
SMAD5-210ENST00000515005 SH2D2AQ9NP31 389 aa10.87□□□□□ -0.67
SMAD5-210ENST00000515005 SPATA7Q9P0W8 599 aa10.87□□□□□ -0.67
SMAD5-210ENST00000515005 MYO6Q9UM54 1294 aa10.87□□□□□ -0.67
SMAD5-210ENST00000515005 R3HDM2Q9Y2K5 976 aaKnown RBP10.87□□□□□ -0.67
SMAD5-210ENST00000515005 MALRD1Q5VYJ5 2156 aa10.87□□□□□ -0.67
SMAD5-210ENST00000515005 ALPK2Q86TB3 2170 aa10.86□□□□□ -0.67
SMAD5-210ENST00000515005 TCRBV16S1A1N1A0A5B0 115 aa10.86□□□□□ -0.67
SMAD5-210ENST00000515005 MBD3L3A6NE82 208 aaPredicted RBP10.86□□□□□ -0.67
SMAD5-210ENST00000515005 MYO1DO94832 1006 aa10.86□□□□□ -0.67
SMAD5-210ENST00000515005 ERGP11308 486 aa10.86□□□□□ -0.67
SMAD5-210ENST00000515005 MSNP26038 577 aaKnown RBP10.86□□□□□ -0.67
SMAD5-210ENST00000515005 FOXN2P32314 431 aa10.86□□□□□ -0.67
SMAD5-210ENST00000515005 OLR1P78380 273 aa10.86□□□□□ -0.67
SMAD5-210ENST00000515005 SPARCL1Q14515 664 aa10.86□□□□□ -0.67
SMAD5-210ENST00000515005 RNF187Q5TA31 235 aaPredicted RBP10.86□□□□□ -0.67
SMAD5-210ENST00000515005 RTL4Q6ZR62 310 aa10.86□□□□□ -0.67
SMAD5-210ENST00000515005 MEX3DQ86XN8 651 aaKnown RBP10.86□□□□□ -0.67
SMAD5-210ENST00000515005 LIX1Q8N485 282 aa10.86□□□□□ -0.67
SMAD5-210ENST00000515005 PPM1NQ8N819 430 aa10.86□□□□□ -0.67
SMAD5-210ENST00000515005 MBD3L2Q8NHZ7 208 aaPredicted RBP10.86□□□□□ -0.67
SMAD5-210ENST00000515005 MARK4Q96L34 752 aa10.86□□□□□ -0.67
SMAD5-210ENST00000515005 TRIB1Q96RU8 372 aa10.86□□□□□ -0.67
SMAD5-210ENST00000515005 RASL10BQ96S79 203 aa10.86□□□□□ -0.67
SMAD5-210ENST00000515005 CARD6Q9BX69 1037 aa10.86□□□□□ -0.67
SMAD5-210ENST00000515005 RBSNQ9H1K0 784 aa10.86□□□□□ -0.67
SMAD5-210ENST00000515005 GBA3Q9H227 469 aa10.86□□□□□ -0.67
SMAD5-210ENST00000515005 ZNF703Q9H7S9 590 aaPredicted RBP10.86□□□□□ -0.67
SMAD5-210ENST00000515005 NECTIN3Q9NQS3 549 aa10.86□□□□□ -0.67
SMAD5-210ENST00000515005 SACM1LQ9NTJ5 587 aa10.86□□□□□ -0.67
SMAD5-210ENST00000515005 ZNF226Q9NYT6 803 aa10.86□□□□□ -0.67
SMAD5-210ENST00000515005 AIPL1Q9NZN9 384 aa10.86□□□□□ -0.67
SMAD5-210ENST00000515005 LPAR3Q9UBY5 353 aa10.86□□□□□ -0.67
SMAD5-210ENST00000515005 ZNF281Q9Y2X9 895 aa10.86□□□□□ -0.67
SMAD5-210ENST00000515005 ATG4BQ9Y4P1 393 aa10.86□□□□□ -0.67
SMAD5-210ENST00000515005 IGKV3D-11A0A0A0MRZ8 115 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 C15orf38-AP3S2A0A0A6YYH1 394 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 CCDC162PA2VCL2 907 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 CD8B2A6NJW9 211 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 H7BY64 318 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 WWP2O00308 870 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 SNPHO15079 494 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 CHST10O43529 356 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 PGRP06401 933 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 TMIGD3P0DMS9 266 aaPredicted RBP10.85□□□□□ -0.67
SMAD5-210ENST00000515005 CCL3P10147 92 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 JAK1P23458 1154 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 PIGAP37287 484 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 NR2C2P49116 596 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 OCRLQ01968 901 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 MEF2AQ02078 507 aaPredicted RBP10.85□□□□□ -0.67
SMAD5-210ENST00000515005 CRYZQ08257 329 aaKnown RBP10.85□□□□□ -0.67
SMAD5-210ENST00000515005 FAM27E3Q08E93 113 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 FAM174BQ3ZCQ3 159 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 QSOX2Q6ZRP7 698 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 BTLAQ7Z6A9 289 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 VSIG1Q86XK7 387 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 ARIH2OSQ8N7S6 290 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 C9orf106Q8NAJ2 232 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 FBXO15Q8NCQ5 510 aaPredicted RBP10.85□□□□□ -0.67
SMAD5-210ENST00000515005 PPFIBP2Q8ND30 876 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 NCLNQ969V3 563 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 NTNG2Q96CW9 530 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 VMP1Q96GC9 406 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 PRAP1Q96NZ9 151 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 TIMP4Q99727 224 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 SHARPINQ9H0F6 387 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 C10orf88Q9H8K7 445 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 ACKR4Q9NPB9 350 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 ABCF3Q9NUQ8 709 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 TMEM160Q9NX00 188 aa10.85□□□□□ -0.67
SMAD5-210ENST00000515005 PSD3Q9NYI0 1048 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms