RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 DMXL2Q8TDJ6 3036 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 URB1O60287 2271 aaKnown RBP10.74□□□□□ -0.69
HTT-213ENST00000513806 A0A1B0GX78 115 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 TMEM114B3SHH9 223 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 STMND1H3BQB6 276 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 TAF4O00268 1085 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 PLPP1O14494 284 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 EEDO75530 441 aaKnown RBP10.74□□□□□ -0.69
HTT-213ENST00000513806 JRKO75564 520 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 KRT6AP02538 564 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 KRT6BP04259 564 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 ENO1P06733 434 aaKnown RBP10.74□□□□□ -0.69
HTT-213ENST00000513806 LINC00032P0C843 101 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 UROSP10746 265 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 ALOX12P18054 663 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 WT1P19544 449 aaPredicted RBP10.74□□□□□ -0.69
HTT-213ENST00000513806 PIK3CBP42338 1070 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 KRT6CP48668 564 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 ARSFP54793 590 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 SF3A3Q12874 501 aaKnown RBP eCLIP10.74□□□□□ -0.692e-7■■■□□ 17.7
HTT-213ENST00000513806 CLN3Q13286 438 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 RUNX2Q13950 521 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 PDCD2Q16342 344 aaPredicted RBP10.74□□□□□ -0.69
HTT-213ENST00000513806 FAM214AQ32MH5 1076 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 UGT3A2Q3SY77 523 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 NKAIN1Q4KMZ8 207 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 DEPDC1Q5TB30 811 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 ARHGAP40Q5TG30 622 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 KHDRBS2Q5VWX1 349 aaKnown RBP10.74□□□□□ -0.69
HTT-213ENST00000513806 CYB5D1Q6P9G0 228 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 ABHD17CQ6PCB6 329 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 FAM198BQ6UWH4 519 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 UNQ6494/PRO21346Q6UXR6 183 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 CACNA2D3Q8IZS8 1091 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 NLGN4XQ8N0W4 816 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 AFAP1L2Q8N4X5 818 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 AMER2Q8N7J2 671 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 NLGN4YQ8NFZ3 816 aaPredicted RBP10.74□□□□□ -0.69
HTT-213ENST00000513806 TTLQ8NG68 377 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 OR2T11Q8NH01 316 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 TWIST2Q8WVJ9 160 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 CKAP2Q8WWK9 683 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 UCN3Q969E3 161 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 NKD1Q969G9 470 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 GAL3ST3Q96A11 431 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 COL26A1Q96A83 441 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 REPS1Q96D71 796 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 THOC1Q96FV9 657 aaKnown RBP10.74□□□□□ -0.69
HTT-213ENST00000513806 CMTM7Q96FZ5 175 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 APIPQ96GX9 242 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 C3orf30Q96M34 536 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 QRFPRQ96P65 431 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 MESP1Q9BRJ9 268 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 ZNF717Q9BY31 904 aaPredicted RBP10.74□□□□□ -0.69
HTT-213ENST00000513806 MRPL1Q9BYD6 325 aaKnown RBP10.74□□□□□ -0.69
HTT-213ENST00000513806 PITHD1Q9GZP4 211 aaPredicted RBP10.74□□□□□ -0.69
HTT-213ENST00000513806 ANKHQ9HCJ1 492 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 PRDM7Q9NQW5 492 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 CTSFQ9UBX1 484 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 IL17BQ9UHF5 180 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 SNX6Q9UNH7 406 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 STK38LQ9Y2H1 464 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 RAXQ9Y2V3 346 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 TRAF6Q9Y4K3 522 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 DNAJC15Q9Y5T4 150 aa10.74□□□□□ -0.69
HTT-213ENST00000513806 FAM227AF5H4B4 570 aa10.73□□□□□ -0.69
HTT-213ENST00000513806 FOXE1O00358 373 aaPredicted RBP10.73□□□□□ -0.69
HTT-213ENST00000513806 TXNDC9O14530 226 aa10.73□□□□□ -0.69
HTT-213ENST00000513806 PIP5K1BO14986 540 aa10.73□□□□□ -0.69
HTT-213ENST00000513806 GALR3O60755 368 aaPredicted RBP10.73□□□□□ -0.69
HTT-213ENST00000513806 SNNO75324 88 aaPredicted RBP10.73□□□□□ -0.69
HTT-213ENST00000513806 ULK1O75385 1050 aa10.73□□□□□ -0.69
HTT-213ENST00000513806 PRKRAO75569 313 aaKnown RBP10.73□□□□□ -0.69
HTT-213ENST00000513806 LIFP15018 202 aa10.73□□□□□ -0.69
HTT-213ENST00000513806 TCN2P20062 427 aa10.73□□□□□ -0.69
HTT-213ENST00000513806 FBLP22087 321 aaKnown RBP10.73□□□□□ -0.69
HTT-213ENST00000513806 GRK2P25098 689 aa10.73□□□□□ -0.69
HTT-213ENST00000513806 DLSTP36957 453 aa10.73□□□□□ -0.69
HTT-213ENST00000513806 RAP1GDS1P52306 607 aa10.73□□□□□ -0.69
HTT-213ENST00000513806 EFNA3P52797 238 aa10.73□□□□□ -0.69
HTT-213ENST00000513806 PCBP4P57723 403 aaKnown RBP10.73□□□□□ -0.69
HTT-213ENST00000513806 STXBP1P61764 594 aaKnown RBP10.73□□□□□ -0.69
HTT-213ENST00000513806 PHEXP78562 749 aa10.73□□□□□ -0.69
HTT-213ENST00000513806 OCRLQ01968 901 aa10.73□□□□□ -0.69
HTT-213ENST00000513806 NDUFA9Q16795 377 aa10.73□□□□□ -0.69
HTT-213ENST00000513806 ADPRMQ3LIE5 342 aa10.73□□□□□ -0.69
HTT-213ENST00000513806 VWA2Q5GFL6 755 aa10.73□□□□□ -0.69
HTT-213ENST00000513806 GARNL3Q5VVW2 1013 aa10.73□□□□□ -0.69
HTT-213ENST00000513806 TRIM40Q6P9F5 258 aa10.73□□□□□ -0.69
HTT-213ENST00000513806 FAM47EQ6ZV65 393 aa10.73□□□□□ -0.69
HTT-213ENST00000513806 DTX1Q86Y01 620 aa10.73□□□□□ -0.69
HTT-213ENST00000513806 DDIASQ8IXT1 998 aa10.73□□□□□ -0.69
HTT-213ENST00000513806 IL22RA1Q8N6P7 574 aa10.73□□□□□ -0.69
HTT-213ENST00000513806 OR2L5Q8NG80 312 aa10.73□□□□□ -0.69
HTT-213ENST00000513806 LRRC8CQ8TDW0 803 aa10.73□□□□□ -0.69
HTT-213ENST00000513806 FGF11Q92914 225 aa10.73□□□□□ -0.69
HTT-213ENST00000513806 PEX11GQ96HA9 241 aa10.73□□□□□ -0.69
HTT-213ENST00000513806 TRMOQ9BU70 441 aa10.73□□□□□ -0.69
HTT-213ENST00000513806 EBPLQ9BY08 206 aa10.73□□□□□ -0.69
HTT-213ENST00000513806 SOX17Q9H6I2 414 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms