RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 EXOC1LA0A1B0GW35 172 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 OR2W5A6NFC9 320 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 URADA6NGE7 173 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 LRRC14BA6NHZ5 514 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 A6NL46 340 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 MAGEB17A8MXT2 336 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 POC1B-GALNT4F8VUJ3 575 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 H0YIV9 168 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 STX16-NPEPL1H3BU86 382 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 STX16O14662 325 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 CCNT2O60583 730 aaKnown RBP9.15□□□□□ -0.94
RNF4-221ENST00000513643 KLHL41O60662 606 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 UGDHO60701 494 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 SCELO95171 688 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 SERPINA7P05543 415 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 HEXBP07686 556 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 FHP07954 510 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 EPB42P16452 691 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 SOX11P35716 441 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 GLRBP48167 497 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 CD97P48960 835 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 RAB8AP61006 207 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 IRF8Q02556 426 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 RUNX2Q13950 521 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 PFKFB4Q16877 469 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 TSNAXIP1Q2TAA8 658 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 NADK2Q4G0N4 442 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 XKR6Q5GH73 641 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 LIPJQ5W064 366 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 GRHL2Q6ISB3 625 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 H3F3CQ6NXT2 135 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 RIPOR1Q6ZS17 1223 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 TAOK1Q7L7X3 1001 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 TDRPQ86YL5 185 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 GSPT2Q8IYD1 628 aaKnown RBP9.15□□□□□ -0.94
RNF4-221ENST00000513643 PRSS58Q8IYP2 241 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 CA13Q8N1Q1 262 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 AMER2Q8N7J2 671 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 OR2L5Q8NG80 312 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 OR7G3Q8NG95 312 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 ACMSDQ8TDX5 336 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 TBC1D20Q96BZ9 403 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 VPS50Q96JG6 964 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 LMF1Q96S06 567 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 BARD1Q99728 777 aaKnown RBP9.15□□□□□ -0.94
RNF4-221ENST00000513643 MRPL57Q9BQC6 102 aaKnown RBP9.15□□□□□ -0.94
RNF4-221ENST00000513643 MS4A8Q9BY19 250 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 LHPPQ9H008 270 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 VPS11Q9H270 941 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 ZBTB26Q9HCK0 441 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 KCMF1Q9P0J7 381 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 HCN3Q9P1Z3 774 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 OPTCQ9UBM4 332 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 TMCO1Q9UM00 188 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 PPT2Q9UMR5 302 aa9.15□□□□□ -0.94
RNF4-221ENST00000513643 TNPO3Q9Y5L0 923 aaKnown RBP9.15□□□□□ -0.94
RNF4-221ENST00000513643 TNRC6AQ8NDV7 1962 aaKnown RBP9.14□□□□□ -0.95
RNF4-221ENST00000513643 ZNF860A6NHJ4 632 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 SUPT3HB4E1H0 165 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 J3QKU1 62 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 CYR61O00622 381 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 OR7A17O14581 309 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 SLC28A2O43868 658 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 SUPT3HO75486 399 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 SIX3O95343 332 aaPredicted RBP9.14□□□□□ -0.95
RNF4-221ENST00000513643 S100BP04271 92 aaPredicted RBP9.14□□□□□ -0.95
RNF4-221ENST00000513643 PRR35P0CG20 571 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 C8orf89P0DMQ9 161 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 ATXN8OSP0DMR3 200 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 SERPINB1P30740 379 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 HNF4AP41235 474 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 PIK3CBP42338 1070 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 ARFIP1P53367 373 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 STXBP1P61764 594 aaKnown RBP9.14□□□□□ -0.95
RNF4-221ENST00000513643 SKP1P63208 163 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 FOXK1P85037 733 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 PAGE2BQ5JRK9 111 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 TOR1AIP1Q5JTV8 583 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 DEPDC1Q5TB30 811 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 LGSNQ5TDP6 509 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 PLAG1Q6DJT9 500 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 JMJD6Q6NYC1 403 aaPredicted RBP9.14□□□□□ -0.95
RNF4-221ENST00000513643 WDR93Q6P2C0 686 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 KLC3Q6P597 504 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 QSOX2Q6ZRP7 698 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 Q6ZS92 163 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 GOLGA7Q7Z5G4 137 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 CPEB2Q7Z5Q1 589 aaKnown RBP9.14□□□□□ -0.95
RNF4-221ENST00000513643 ANKRD37Q7Z713 158 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 SCUBE1Q8IWY4 988 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 PARP9Q8IXQ6 854 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 TEX9Q8N6V9 391 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 SNX31Q8N9S9 440 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 TEX19Q8NA77 164 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 WDR20Q8TBZ3 569 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 UBE2E3Q969T4 207 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 PNPLA2Q96AD5 504 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 PEX11GQ96HA9 241 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 TUBB6Q9BUF5 446 aa9.14□□□□□ -0.95
RNF4-221ENST00000513643 NTMT1Q9BV86 223 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms