RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 AARS2Q5JTZ9 985 aaKnown RBP3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 DNTTIP2Q5QJE6 756 aaKnown RBP3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 FAM72AQ5TYM5 149 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 RNF220Q5VTB9 566 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 MLIPQ5VWP3 458 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 TMEM198Q66K66 360 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 DENND2CQ68D51 928 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 FAM72DQ6L9T8 149 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 ANKRD16Q6P6B7 361 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 FAM198BQ6UWH4 519 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 C18orf65Q6ZTR6 163 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 B4GALNT4Q76KP1 1039 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 PPP1R32Q7Z5V6 425 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 SLFN11Q7Z7L1 901 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 TMEM200AQ86VY9 491 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 FAM72BQ86X60 149 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 MSANTD4Q8NCY6 345 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 ACRBPQ8NEB7 543 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 CATSPER1Q8NEC5 780 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 MYRIPQ8NFW9 859 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 LILRB4Q8NHJ6 448 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 PRSS3P2Q8NHM4 247 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 C16orf52Q8NHV5 167 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 ASB5Q8WWX0 329 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 LRTOMTQ8WZ04 291 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 CXorf40BQ96DE9 158 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 CCDC34Q96HJ3 373 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 MOGAT1Q96PD6 335 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 NUDCD1Q96RS6 583 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 OSBPL9Q96SU4 736 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 EIF3CQ99613 913 aaKnown RBP3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 TIMM29Q9BSF4 260 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 TMEM121Q9BTD3 319 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 CNPPD1Q9BV87 410 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 RIOK2Q9BVS4 552 aaKnown RBP3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 SARGQ9BW04 601 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 CINPQ9BW66 212 aaPredicted RBP3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 SLC7A5P2Q9GIP4 190 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 NUP62CLQ9H1M0 184 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 FAM83DQ9H4H8 585 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 LRRC19Q9H756 370 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 HRASLS2Q9NWW9 162 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 RCOR1Q9UKL0 485 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 CFAP45Q9UL16 551 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 NEU3Q9UQ49 428 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 KCNK6Q9Y257 313 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 MED16Q9Y2X0 877 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 MRPS2Q9Y399 296 aaKnown RBP3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 PTRH2Q9Y3E5 179 aaKnown RBP3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 CSAG2Q9Y5P2 127 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 NUP210LQ5VU65 1888 aa3.49□□□□□ -1.85
PDLIM5-218ENST00000513341 HIVEP2P31629 2446 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 A0A0J9YYE9 177 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 FAM237AA0A1B0GTK4 181 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 NPIPB15A6NHN6 443 aaPredicted RBP3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 PDZK1P1A8MUH7 402 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 BECN2A8MW95 431 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 E7EQ34 232 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 ZNF749O43361 778 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 CTAG2O75638 210 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 PGLSO95336 258 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 GNA14O95837 355 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 TRBC1P01850 177 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 ALPLP05186 524 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 BRAFP15056 766 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 CYP11B1P15538 503 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 ZNF7P17097 686 aaPredicted RBP3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 CYP2A7P20853 494 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 SDC4P31431 198 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 RFC1P35251 1148 aaPredicted RBP3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 SPAM1P38567 509 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 PPP1R2P41236 205 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 RGRP47804 291 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 ME1P48163 572 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 KCNJ5P48544 419 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 PAPOLAP51003 745 aaKnown RBP3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 DGKQP52824 942 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 RPL26P61254 145 aaKnown RBP3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 AP2B1P63010 937 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 ARG2P78540 354 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 PPP2R2BQ00005 443 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 CACNG1Q06432 222 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 DMPKQ09013 629 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 CEBPEQ15744 281 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 C3AR1Q16581 482 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 SLC5A12Q1EHB4 618 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 ZNF789Q5FWF6 425 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 HENMT1Q5T8I9 393 aaKnown RBP3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 ARMC12Q5T9G4 340 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 SHEQ5VZ18 495 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 LRRC66Q68CR7 880 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 PDPK2PQ6A1A2 396 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 TMEM211Q6ICI0 200 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 RHBDD2Q6NTF9 364 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 TTI2Q6NXR4 508 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 NAPRTQ6XQN6 538 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 Q71RC1 249 aaPredicted RBP3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 SLC29A4Q7RTT9 530 aa3.48□□□□□ -1.85
PDLIM5-218ENST00000513341 LRRTM4Q86VH4 590 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms