RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 KLHDC8AQ8IYD2 350 aa13.68□□□□□ -0.22
LETM1-207ENST00000512669 ANKRD53Q8N9V6 530 aa13.68□□□□□ -0.22
LETM1-207ENST00000512669 OR5T3Q8NGG3 340 aa13.68□□□□□ -0.22
LETM1-207ENST00000512669 OR51Q1Q8NH59 317 aa13.68□□□□□ -0.22
LETM1-207ENST00000512669 IMMP1LQ96LU5 166 aa13.68□□□□□ -0.22
LETM1-207ENST00000512669 ZNF354BQ96LW1 612 aa13.68□□□□□ -0.22
LETM1-207ENST00000512669 GPR22Q99680 433 aa13.68□□□□□ -0.22
LETM1-207ENST00000512669 RBBP8Q99708 897 aa13.68□□□□□ -0.22
LETM1-207ENST00000512669 LRRC1Q9BTT6 524 aa13.68□□□□□ -0.22
LETM1-207ENST00000512669 NSMCE4AQ9NXX6 385 aa13.68□□□□□ -0.22
LETM1-207ENST00000512669 SH3BGRL2Q9UJC5 107 aa13.68□□□□□ -0.22
LETM1-207ENST00000512669 NAALAD2Q9Y3Q0 740 aa13.68□□□□□ -0.22
LETM1-207ENST00000512669 SLC22A7Q9Y694 548 aa13.68□□□□□ -0.22
LETM1-207ENST00000512669 ZFHX3Q15911 3703 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 MED13LQ71F56 2210 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 IGHV3-20A0A0C4DH32 117 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 ESYT3A0FGR9 886 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 C4orf51C9J302 202 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 CDK2AP1O14519 115 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 PRAMEF4O60810 478 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 RDH16O75452 317 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 F10P00742 488 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 CD1DP15813 335 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 MAGEA4P43358 317 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 SLC6A12P48065 614 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 ADORA2A-AS1P86434 159 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 REEP5Q00765 189 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 CSHL1Q14406 222 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 OR4D1Q15615 310 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 ZKSCAN8Q15776 578 aaPredicted RBP13.67□□□□□ -0.22
LETM1-207ENST00000512669 KBTBD12Q3ZCT8 623 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 PRAMEF9Q5VWM5 478 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 PLAG1Q6DJT9 500 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 NXPE4Q6UWF7 544 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 Q6ZPB1 254 aaPredicted RBP13.67□□□□□ -0.22
LETM1-207ENST00000512669 LANCL3Q6ZV70 420 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 FAM98AQ8NCA5 519 aaKnown RBP13.67□□□□□ -0.22
LETM1-207ENST00000512669 NT5CQ8TCD5 201 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 CHTF18Q8WVB6 975 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 RHBDF1Q96CC6 855 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 MTFMTQ96DP5 389 aaKnown RBP13.67□□□□□ -0.22
LETM1-207ENST00000512669 GPR137Q96N19 417 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 CYTH2Q99418 400 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 CPNE1Q99829 537 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 SPOCK3Q9BQ16 436 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 TMEM79Q9BSE2 394 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 DERL2Q9GZP9 239 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 KLHL31Q9H511 634 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 LANCL2Q9NS86 450 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 ZDHHC18Q9NUE0 388 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 CTNNAL1Q9UBT7 734 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 ZNF835Q9Y2P0 537 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 UTP11Q9Y3A2 253 aaKnown RBP13.67□□□□□ -0.22
LETM1-207ENST00000512669 AKAP9Q99996 3911 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 HIVEP1P15822 2718 aa13.67□□□□□ -0.22
LETM1-207ENST00000512669 SCN2AQ99250 2005 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 SETD2Q9BYW2 2564 aaPredicted RBP13.66□□□□□ -0.22
LETM1-207ENST00000512669 ZNF860A6NHJ4 632 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 NDUFS4O43181 175 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 GALR3O60755 368 aaPredicted RBP13.66□□□□□ -0.22
LETM1-207ENST00000512669 GSTA2P09210 222 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 CCDC166P0CW27 439 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 SMIM10L1P0DMW3 83 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 GRK3P35626 688 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 GP5P40197 560 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 XCR1P46094 333 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 AGTR2P50052 363 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 DLG1Q12959 904 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 PWP1Q13610 501 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 USP10Q14694 798 aaKnown RBP13.66□□□□□ -0.22
LETM1-207ENST00000512669 EFTUD2Q15029 972 aaKnown RBP eCLIP13.66□□□□□ -0.222e-6■■■■■ 35.3
LETM1-207ENST00000512669 C3AR1Q16581 482 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 KRTAP21-3Q3LHN1 58 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 FBXO48Q5FWF7 155 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 SPNS3Q6ZMD2 512 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 SLCO4C1Q6ZQN7 724 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 SPPL2CQ8IUH8 684 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 HORMAD2Q8N7B1 307 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 TMEM178AQ8NBL3 297 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 UTP15Q8TED0 518 aaKnown RBP13.66□□□□□ -0.22
LETM1-207ENST00000512669 FBF1Q8TES7 1133 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 CREB3L4Q8TEY5 395 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 ESAMQ96AP7 390 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 SMIM10Q96HG1 83 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 UBXN10Q96LJ8 280 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 FAM129AQ9BZQ8 928 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 PHACTR1Q9C0D0 580 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 PELI2Q9HAT8 420 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 ANKHQ9HCJ1 492 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 ZFP69BQ9UJL9 534 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 ITGB1BP2Q9UKP3 347 aa13.66□□□□□ -0.22
LETM1-207ENST00000512669 CELSR1Q9NYQ6 3014 aa13.65□□□□□ -0.22
LETM1-207ENST00000512669 ASPDHA6ND91 283 aa13.65□□□□□ -0.22
LETM1-207ENST00000512669 NCF1BA6NI72 391 aaPredicted RBP13.65□□□□□ -0.22
LETM1-207ENST00000512669 NCF1CA8MVU1 366 aaPredicted RBP13.65□□□□□ -0.22
LETM1-207ENST00000512669 KRT38O76015 456 aa13.65□□□□□ -0.22
LETM1-207ENST00000512669 SLC35G6P0C7Q6 338 aa13.65□□□□□ -0.22
LETM1-207ENST00000512669 NCF1P14598 390 aaPredicted RBP13.65□□□□□ -0.22
LETM1-207ENST00000512669 CD46P15529 392 aa13.65□□□□□ -0.22
LETM1-207ENST00000512669 EEF1DP29692 281 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms