RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 DRG1Q9Y295 367 aaKnown RBP8.48□□□□□ -1.05
NUP54-211ENST00000512151 DSCAMO60469 2012 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 CR1P17927 2039 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 EML6Q6ZMW3 1958 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 EFCAB8A8MWE9 144 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 G3V3Y1 287 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 SIAH2O43255 324 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 WDR1O75083 606 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 GLSO94925 669 aaPredicted RBP8.48□□□□□ -1.05
NUP54-211ENST00000512151 FTH1P02794 183 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 ENDOUP21128 410 aaKnown RBP8.48□□□□□ -1.05
NUP54-211ENST00000512151 CCR7P32248 378 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 MAGEA5P43359 124 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 TNNT3P45378 269 aaPredicted RBP8.48□□□□□ -1.05
NUP54-211ENST00000512151 BDKRB1P46663 353 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 MRPS25P82663 173 aaKnown RBP8.48□□□□□ -1.05
NUP54-211ENST00000512151 TNK1Q13470 666 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 PTK6Q13882 451 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 WHAMMP3Q1A5X7 153 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 CCDC137Q6PK04 289 aaKnown RBP8.48□□□□□ -1.05
NUP54-211ENST00000512151 RANBP10Q6VN20 620 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 CDKL3Q8IVW4 592 aaPredicted RBP8.48□□□□□ -1.05
NUP54-211ENST00000512151 KLHL7Q8IXQ5 586 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 CYP4Z2PQ8N1L4 340 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 ARMC10Q8N2F6 343 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 FAM71DQ8N9W8 422 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 OR2M7Q8NG81 312 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 PIGTQ969N2 578 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 NAP1L3Q99457 506 aaPredicted RBP8.48□□□□□ -1.05
NUP54-211ENST00000512151 ACAT2Q9BWD1 397 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 FSD1LQ9BXM9 530 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 FRMD8P1Q9BZ68 369 aaPredicted RBP8.48□□□□□ -1.05
NUP54-211ENST00000512151 TTTY12Q9BZ98 90 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 LANCL2Q9NS86 450 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 KLHL8Q9P2G9 620 aaPredicted RBP8.48□□□□□ -1.05
NUP54-211ENST00000512151 SPRR3Q9UBC9 169 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 ACAD8Q9UKU7 415 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 ZNF148Q9UQR1 794 aa8.48□□□□□ -1.05
NUP54-211ENST00000512151 ROS1P08922 2347 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 C2orf72A6NCS6 295 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 OR51F1A6NGY5 319 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 HSPB2A8KAH6 182 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 SGK494L7N484 410 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 AQP7O14520 342 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 OR1I1O60431 355 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 CDC123O75794 336 aaPredicted RBP8.47□□□□□ -1.05
NUP54-211ENST00000512151 SOX30O94993 753 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 GOSR1O95249 250 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 METTL18O95568 372 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 PTH2RP49190 550 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 ZNF136P52737 540 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 OR4D2P58180 307 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 PLGLB1Q02325 96 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 FAM53BQ14153 422 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 NSDHLQ15738 373 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 HSPB2Q16082 182 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 ANKRD20A2Q5SQ80 823 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 ANKRD20A1Q5TYW2 823 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 ANKRD20A3Q5VUR7 823 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 DENND5AQ6IQ26 1287 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 PID1Q7Z2X4 250 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 PLD3Q8IV08 490 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 TMEM251Q8N6I4 163 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 PLPP5Q8NEB5 264 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 MNS1Q8NEH6 495 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 KRT12Q99456 494 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 CCL19Q99731 98 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 MACROD1Q9BQ69 325 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 CARD6Q9BX69 1037 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 HOMER3Q9NSC5 361 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 KCMF1Q9P0J7 381 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 MTRF1LQ9UGC7 380 aaKnown RBP8.47□□□□□ -1.05
NUP54-211ENST00000512151 FOXD3Q9UJU5 478 aaPredicted RBP8.47□□□□□ -1.05
NUP54-211ENST00000512151 RUVBL2Q9Y230 463 aaKnown RBP8.47□□□□□ -1.05
NUP54-211ENST00000512151 NFS1Q9Y697 457 aa8.47□□□□□ -1.05
NUP54-211ENST00000512151 RAI1Q7Z5J4 1906 aaPredicted RBP8.46□□□□□ -1.06
NUP54-211ENST00000512151 H0YIG0 161 aa8.46□□□□□ -1.06
NUP54-211ENST00000512151 CCDC188H7C350 402 aa8.46□□□□□ -1.06
NUP54-211ENST00000512151 QSOX1O00391 747 aa8.46□□□□□ -1.06
NUP54-211ENST00000512151 DVL2O14641 736 aa8.46□□□□□ -1.06
NUP54-211ENST00000512151 SPRY1O43609 319 aaPredicted RBP8.46□□□□□ -1.06
NUP54-211ENST00000512151 GPC4O75487 556 aa8.46□□□□□ -1.06
NUP54-211ENST00000512151 CRTAMO95727 393 aa8.46□□□□□ -1.06
NUP54-211ENST00000512151 IL1RNP18510 177 aa8.46□□□□□ -1.06
NUP54-211ENST00000512151 STIP1P31948 543 aaKnown RBP8.46□□□□□ -1.06
NUP54-211ENST00000512151 CEACAM8P31997 349 aaPredicted RBP8.46□□□□□ -1.06
NUP54-211ENST00000512151 RPL22P35268 128 aaKnown RBP8.46□□□□□ -1.06
NUP54-211ENST00000512151 AVPR1BP47901 424 aa8.46□□□□□ -1.06
NUP54-211ENST00000512151 FNTAP49354 379 aa8.46□□□□□ -1.06
NUP54-211ENST00000512151 AGFG1P52594 562 aaKnown RBP8.46□□□□□ -1.06
NUP54-211ENST00000512151 PLOD1Q02809 727 aaPredicted RBP8.46□□□□□ -1.06
NUP54-211ENST00000512151 CKAP4Q07065 602 aaKnown RBP8.46□□□□□ -1.06
NUP54-211ENST00000512151 HSPA14Q0VDF9 509 aa8.46□□□□□ -1.06
NUP54-211ENST00000512151 TRIP13Q15645 432 aaPredicted RBP8.46□□□□□ -1.06
NUP54-211ENST00000512151 ERCC6LQ2NKX8 1250 aa8.46□□□□□ -1.06
NUP54-211ENST00000512151 ZNF425Q6IV72 752 aa8.46□□□□□ -1.06
NUP54-211ENST00000512151 PACS1Q6VY07 963 aa8.46□□□□□ -1.06
NUP54-211ENST00000512151 KIF18BQ86Y91 864 aa8.46□□□□□ -1.06
NUP54-211ENST00000512151 PDSS2Q86YH6 399 aa8.46□□□□□ -1.06
NUP54-211ENST00000512151 NOA1Q8NC60 698 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms