RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	DTX1	Q86Y01	620 aa		13.8	□□□□□ -0.2
MATR3-238	ENST00000512107	GPR135	Q8IZ08	494 aa		13.8	□□□□□ -0.2
MATR3-238	ENST00000512107	TTC29	Q8NA56	475 aa	Predicted RBP	13.8	□□□□□ -0.2
MATR3-238	ENST00000512107	TWIST2	Q8WVJ9	160 aa		13.8	□□□□□ -0.2
MATR3-238	ENST00000512107	UBE2E3	Q969T4	207 aa		13.8	□□□□□ -0.2
MATR3-238	ENST00000512107	PPP1R36	Q96LQ0	422 aa		13.8	□□□□□ -0.2
MATR3-238	ENST00000512107	MAGEB18	Q96M61	343 aa		13.8	□□□□□ -0.2
MATR3-238	ENST00000512107	C17orf62	Q9BQA9	187 aa		13.8	□□□□□ -0.2
MATR3-238	ENST00000512107	MESP1	Q9BRJ9	268 aa		13.8	□□□□□ -0.2
MATR3-238	ENST00000512107	MRPL1	Q9BYD6	325 aa	Known RBP	13.8	□□□□□ -0.2
MATR3-238	ENST00000512107	CHST8	Q9H2A9	424 aa		13.8	□□□□□ -0.2
MATR3-238	ENST00000512107	ELOVL6	Q9H5J4	265 aa		13.8	□□□□□ -0.2
MATR3-238	ENST00000512107	THAP1	Q9NVV9	213 aa		13.8	□□□□□ -0.2
MATR3-238	ENST00000512107	NAALAD2	Q9Y3Q0	740 aa		13.8	□□□□□ -0.2
MATR3-238	ENST00000512107	LOC101059948	A0A1B0GTJ6	334 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	SERTM1	A2A2V5	107 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	MEN1	O00255	615 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	TAF4	O00268	1085 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	ERI3	O43414	337 aa	Known RBP	13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	TMPRSS11D	O60235	418 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	GALR3	O60755	368 aa	Predicted RBP	13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	JRK	O75564	520 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	GBA	P04062	536 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	SLC35G6	P0C7Q6	338 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	KIT	P10721	976 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	ALOX12	P18054	663 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	CERS1	P27544	350 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	RBMS1	P29558	406 aa	Known RBP	13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	EMP3	P54852	163 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	NAA20	P61599	178 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	BTN3A2	P78410	334 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	IFT88	Q13099	833 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	PDCD2	Q16342	344 aa	Predicted RBP	13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	TBC1D25	Q3MII6	688 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	ZNF517	Q6ZMY9	492 aa	Predicted RBP	13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	FAM47E	Q6ZV65	393 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	TRIM46	Q7Z4K8	759 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	CLYBL	Q8N0X4	340 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	TMEM52	Q8NDY8	209 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	FAM76A	Q8TAV0	307 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	RAB3IL1	Q8TBN0	382 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	CT55	Q8WUE5	264 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	NXPE2	Q96DL1	559 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	CLIP3	Q96DZ5	547 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	CMTM7	Q96FZ5	175 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	SLC45A3	Q96JT2	553 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	REXO4	Q9GZR2	422 aa	Known RBP	13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	HCN3	Q9P1Z3	774 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	NDOR1	Q9UHB4	597 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	SNX6	Q9UNH7	406 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	SLC12A4	Q9UP95	1085 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	STK38L	Q9Y2H1	464 aa		13.79	□□□□□ -0.2
MATR3-238	ENST00000512107	USP24	Q9UPU5	2620 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	SEC16A	O15027	2179 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107		A0A1B0GX78	115 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	WASHC1	A8K0Z3	465 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	TCP11X1	B4DZS4	312 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	FAM227A	F5H4B4	570 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	RAD1	O60671	282 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	CPNE3	O75131	537 aa	Known RBP	13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	ULK1	O75385	1050 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	PRKRA	O75569	313 aa	Known RBP	13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	ONECUT2	O95948	504 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	KRT6A	P02538	564 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	KRT6B	P04259	564 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	ATP5A1	P25705	553 aa	Known RBP	13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	MDH1	P40925	334 aa	Known RBP	13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	KRT6C	P48668	564 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	RPL14	P50914	215 aa	Known RBP	13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	HNRNPF	P52597	415 aa	Known RBP	13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	RGS1	Q08116	209 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	ERV3-1	Q14264	604 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	KIAA0040	Q15053	153 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	XKR7	Q5GH72	579 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	MANEA	Q5SRI9	462 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	GARNL3	Q5VVW2	1013 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	C6orf15	Q6UXA7	325 aa	Predicted RBP	13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	RGS9BP	Q6ZS82	235 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	WDR75	Q8IWA0	830 aa	Known RBP	13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	MMP21	Q8N119	569 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	CA13	Q8N1Q1	262 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	METTL4	Q8N3J2	472 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	TBC1D19	Q8N5T2	526 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	TTL	Q8NG68	377 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	OR2L5	Q8NG80	312 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	LRRC8C	Q8TDW0	803 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	NUDT8	Q8WV74	236 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	CHTF18	Q8WVB6	975 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	DYDC1	Q8WWB3	177 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	NKD1	Q969G9	470 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	GAL3ST3	Q96A11	431 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	REPS1	Q96D71	796 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	MMAB	Q96EY8	250 aa	Predicted RBP	13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	C11orf24	Q96F05	449 aa	Predicted RBP	13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	THOC1	Q96FV9	657 aa	Known RBP	13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	CSF3R	Q99062	836 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	ZPBP	Q9BS86	351 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	NDC1	Q9BTX1	674 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	ASPSCR1	Q9BZE9	553 aa		13.78	□□□□□ -0.2
MATR3-238	ENST00000512107	B3GNT4	Q9C0J1	378 aa		13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms