RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 CAP1Q01518 475 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 NCF4Q15080 339 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 RPS6KA2Q15349 733 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 FAM74A1Q5RGS3 127 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 APOBEC3HQ6NTF7 200 aaKnown RBP7.06□□□□□ -1.28
CPNE4-208ENST00000511604 ANGPTL8Q6UXH0 198 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 ZPBP2Q6X784 338 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 GCNT7Q6ZNI0 430 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 KCNMB4Q86W47 210 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 ZDHHC17Q8IUH5 632 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 ZNF567Q8N184 647 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 OXR1Q8N573 874 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 EFHBQ8N7U6 833 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 DMBX1Q8NFW5 382 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 RHBDF1Q96CC6 855 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 COL21A1Q96P44 957 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 ERMAPQ96PL5 475 aaPredicted RBP7.06□□□□□ -1.28
CPNE4-208ENST00000511604 KCTD15Q96SI1 283 aaPredicted RBP7.06□□□□□ -1.28
CPNE4-208ENST00000511604 GPR22Q99680 433 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 MAP3K3Q99759 626 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 H2AFJQ9BTM1 129 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 QRSL1Q9H0R6 528 aaKnown RBP7.06□□□□□ -1.28
CPNE4-208ENST00000511604 XYLT2Q9H1B5 865 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 POLR3FQ9H1D9 316 aaPredicted RBP7.06□□□□□ -1.28
CPNE4-208ENST00000511604 NT5DC2Q9H857 520 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 CASS4Q9NQ75 786 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 SNTG1Q9NSN8 517 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 PIM2Q9P1W9 311 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 MRPL42Q9Y6G3 142 aaKnown RBP7.06□□□□□ -1.28
CPNE4-208ENST00000511604 ARID2Q68CP9 1835 aa7.06□□□□□ -1.28
CPNE4-208ENST00000511604 A0A0A0MRY4 1105 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 A0A1W2PQL4 384 aaPredicted RBP7.05□□□□□ -1.28
CPNE4-208ENST00000511604 FAM234BA2RU67 622 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 LCHNA4D1U4 455 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 H3BM21 787 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 M0QYV0 167 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 EEDO75530 441 aaKnown RBP7.05□□□□□ -1.28
CPNE4-208ENST00000511604 PRAMEF1O95521 474 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 LY86O95711 162 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 CNPP09543 421 aaKnown RBP7.05□□□□□ -1.28
CPNE4-208ENST00000511604 RD3LP0DJH9 198 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 NDUFB7P17568 137 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 RHCEP18577 417 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 PAICSP22234 425 aaKnown RBP7.05□□□□□ -1.28
CPNE4-208ENST00000511604 C21orf58P58505 322 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 TGFB2P61812 414 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 DGKZQ13574 1117 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 RCAN2Q14206 197 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 CSHL1Q14406 222 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 TMEM132BQ14DG7 1078 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 TAF1AQ15573 450 aaPredicted RBP7.05□□□□□ -1.28
CPNE4-208ENST00000511604 TSTQ16762 297 aaKnown RBP7.05□□□□□ -1.28
CPNE4-208ENST00000511604 FAM98CQ17RN3 349 aaKnown RBP7.05□□□□□ -1.28
CPNE4-208ENST00000511604 KANK2Q63ZY3 851 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 CYB5R2Q6BCY4 276 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 SCIMPQ6UWF3 145 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 SLC44A2Q8IWA5 706 aaPredicted RBP7.05□□□□□ -1.28
CPNE4-208ENST00000511604 C4orf19Q8IY42 314 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 NIM1KQ8IY84 436 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 TMEM192Q8IY95 271 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 ADGRF3Q8IZF5 1079 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 Q8N402 240 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 PGBD5Q8N414 524 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 ZNF454Q8N9F8 522 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 IPMKQ8NFU5 416 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 TSPEARQ8WU66 669 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 ISG20Q96AZ6 181 aaKnown RBP7.05□□□□□ -1.28
CPNE4-208ENST00000511604 TMEM41AQ96HV5 264 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 SPATA13Q96N96 652 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 SFXN2Q96NB2 322 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 CSPG4P5Q96PW8 444 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 SARGQ9BW04 601 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 MCOLN1Q9GZU1 580 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 SEBOXQ9HB31 216 aaPredicted RBP7.05□□□□□ -1.28
CPNE4-208ENST00000511604 ZNF334Q9HCZ1 680 aaPredicted RBP7.05□□□□□ -1.28
CPNE4-208ENST00000511604 CHMP1AQ9HD42 196 aaPredicted RBP7.05□□□□□ -1.28
CPNE4-208ENST00000511604 AMBNQ9NP70 447 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 EXOSC4Q9NPD3 245 aaKnown RBP7.05□□□□□ -1.28
CPNE4-208ENST00000511604 C14orf105Q9NVL8 296 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 BTG4Q9NY30 223 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 VNN3Q9NY84 501 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 EXTL2Q9UBQ6 330 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 SEC14L3Q9UDX4 400 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 LIMD1Q9UGP4 676 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 DMRT1Q9Y5R6 373 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 AP1M2Q9Y6Q5 423 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 A0A1W2PRQ8 180 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 ANKDD1BA6NHY2 528 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 CLCA1A8K7I4 914 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 A8MT66 165 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 AOC2O75106 756 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 APBB3O95704 486 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 MT-CYBP00156 380 aaPredicted RBP7.05□□□□□ -1.28
CPNE4-208ENST00000511604 SERPINA1P01009 418 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 HOXB8P17481 243 aaPredicted RBP7.05□□□□□ -1.28
CPNE4-208ENST00000511604 ATP5A1P25705 553 aaKnown RBP7.05□□□□□ -1.28
CPNE4-208ENST00000511604 APEX1P27695 318 aaKnown RBP7.05□□□□□ -1.28
CPNE4-208ENST00000511604 LAP3P28838 519 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 PBX3P40426 434 aa7.05□□□□□ -1.28
CPNE4-208ENST00000511604 PTGFRP43088 359 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms