RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 KCNF1Q9H3M0 494 aa11.86□□□□□ -0.51
KDM3B-206ENST00000509468 PRDM9Q9NQV7 894 aa11.86□□□□□ -0.51
KDM3B-206ENST00000509468 KLHL1Q9NR64 748 aa11.86□□□□□ -0.51
KDM3B-206ENST00000509468 LRFN1Q9P244 771 aa11.86□□□□□ -0.51
KDM3B-206ENST00000509468 KLF2Q9Y5W3 355 aaPredicted RBP11.86□□□□□ -0.51
KDM3B-206ENST00000509468 CENPEQ02224 2701 aa11.86□□□□□ -0.51
KDM3B-206ENST00000509468 GABRR3A8MPY1 467 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 PRSS44E7EML9 344 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 E7ESA3 106 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 SP1P08047 785 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 ESRRAP11474 423 aaPredicted RBP11.85□□□□□ -0.51
KDM3B-206ENST00000509468 HNF4AP41235 474 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 CYB561P49447 251 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 BTG2P78543 158 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 POU4F1Q01851 419 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 ALDH6A1Q02252 535 aaKnown RBP11.85□□□□□ -0.51
KDM3B-206ENST00000509468 NAA30Q147X3 362 aaPredicted RBP11.85□□□□□ -0.51
KDM3B-206ENST00000509468 MAPKAPK3Q16644 382 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 CDKL4Q5MAI5 379 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 XKRXQ6PP77 449 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 TMIGD1Q6UXZ0 262 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 RPTNQ6XPR3 784 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 MRGPRGQ86SM5 289 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 TMPRSS11BQ86T26 416 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 TICAM1Q8IUC6 712 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 KRT78Q8N1N4 520 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 TCAIMQ8N3R3 496 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 ANKRD53Q8N9V6 530 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 CREB3L4Q8TEY5 395 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 PYROXD1Q8WU10 500 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 CDKL2Q92772 493 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 MARVELD3Q96A59 401 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 TSPAN17Q96FV3 270 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 NPAS2Q99743 824 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 TRIM51Q9BSJ1 452 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 SPNS1Q9H2V7 528 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 RHOJQ9H4E5 214 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 KLHL31Q9H511 634 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 NT5DC2Q9H857 520 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 CNOT10Q9H9A5 744 aaKnown RBP11.85□□□□□ -0.51
KDM3B-206ENST00000509468 GPAMQ9HCL2 828 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 ANKRD10Q9NXR5 420 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 TXNDC16Q9P2K2 825 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 IKZF3Q9UKT9 509 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 PSAT1Q9Y617 370 aa11.85□□□□□ -0.51
KDM3B-206ENST00000509468 ITPR2Q14571 2701 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 A0A088AWK7 358 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 TCRBV16S1A1N1A0A5B0 115 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 ASPDHA6ND91 283 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 LRIT2A6NDA9 550 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 NPEPPSL1A6NEC2 478 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 CLDN4O14493 209 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 FCHO1O14526 889 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 TP73O15350 636 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 SLC19A2O60779 497 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 WDR47O94967 919 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 B3GALT4O96024 378 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 ZNF10P21506 573 aaPredicted RBP11.84□□□□□ -0.51
KDM3B-206ENST00000509468 RPL21P46778 160 aaKnown RBP11.84□□□□□ -0.51
KDM3B-206ENST00000509468 BTN3A2P78410 334 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 PMP22Q01453 160 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 HYAL2Q12891 473 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 CALCOCO2Q13137 446 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 TOR1AIP1Q5JTV8 583 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 SLCO4C1Q6ZQN7 724 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 CYS1Q717R9 158 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 MAATS1Q7Z4T9 603 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 KLHDC8AQ8IYD2 350 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 ZBED8Q8IZ13 594 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 ZNF808Q8N4W9 903 aaPredicted RBP11.84□□□□□ -0.51
KDM3B-206ENST00000509468 TMEM125Q96AQ2 219 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 RHBDF1Q96CC6 855 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 GPR137Q96N19 417 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 KRT12Q99456 494 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 WDR83Q9BRX9 315 aaKnown RBP11.84□□□□□ -0.51
KDM3B-206ENST00000509468 DEFB126Q9BYW3 111 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 DERL2Q9GZP9 239 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 RHBGQ9H310 441 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 TRIM45Q9H8W5 580 aaPredicted RBP11.84□□□□□ -0.51
KDM3B-206ENST00000509468 CHST11Q9NPF2 352 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 GPRC5BQ9NZH0 403 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 SNX24Q9Y343 169 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 MMACHCQ9Y4U1 282 aa11.84□□□□□ -0.51
KDM3B-206ENST00000509468 ARHGAP10A1A4S6 786 aa11.83□□□□□ -0.52
KDM3B-206ENST00000509468 SYNDIG1LA6NDD5 238 aa11.83□□□□□ -0.52
KDM3B-206ENST00000509468 ANKDD1BA6NHY2 528 aa11.83□□□□□ -0.52
KDM3B-206ENST00000509468 SAGE2PA6NJ88 616 aa11.83□□□□□ -0.52
KDM3B-206ENST00000509468 USP27XA6NNY8 438 aa11.83□□□□□ -0.52
KDM3B-206ENST00000509468 FAM227AF5H4B4 570 aa11.83□□□□□ -0.52
KDM3B-206ENST00000509468 CLGNO14967 610 aa11.83□□□□□ -0.52
KDM3B-206ENST00000509468 EIF3HO15372 352 aaKnown RBP eCLIP11.83□□□□□ -0.52
KDM3B-206ENST00000509468 ASNA1O43681 348 aa11.83□□□□□ -0.52
KDM3B-206ENST00000509468 MAN1A2O60476 641 aa11.83□□□□□ -0.52
KDM3B-206ENST00000509468 NEURL1O76050 574 aa11.83□□□□□ -0.52
KDM3B-206ENST00000509468 MAOAP21397 527 aa11.83□□□□□ -0.52
KDM3B-206ENST00000509468 TPP2P29144 1249 aaPredicted RBP11.83□□□□□ -0.52
KDM3B-206ENST00000509468 TRHRP34981 398 aaPredicted RBP11.83□□□□□ -0.52
KDM3B-206ENST00000509468 GGT5P36269 586 aa11.83□□□□□ -0.52
KDM3B-206ENST00000509468 GDF5P43026 501 aa11.83□□□□□ -0.52
KDM3B-206ENST00000509468 SLC6A12P48065 614 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms