RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 SLC35G6P0C7Q6 338 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 SMIM10L1P0DMW3 83 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 HIST1H2ADP20671 130 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 IL10P22301 178 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 MST1P26927 711 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 HNF4AP41235 474 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 CA7P43166 264 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 KCNC1P48547 511 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 RAB8AP61006 207 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 BTG2P78543 158 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 ZNF33BQ06732 778 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 DLG1Q12959 904 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 OR4D1Q15615 310 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 EXT1Q16394 746 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 BTBD16Q32M84 506 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 NXPE4Q6UWF7 544 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 VN1R5Q7Z5H4 357 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 MRGPRGQ86SM5 289 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.25□□□□□ -0.773e-6■■■■■ 69.6
RNF4-212ENST00000509258 KIF2BQ8N4N8 673 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 TBC1D19Q8N5T2 526 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 HORMAD2Q8N7B1 307 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 NT5CQ8TCD5 201 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 RHBDF1Q96CC6 855 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 SMIM10Q96HG1 83 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 HIST1H2AHQ96KK5 128 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 RUNDC3BQ96NL0 473 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 HIST1H2AJQ99878 128 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 ERP44Q9BS26 406 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 H2AFJQ9BTM1 129 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 HES7Q9BYE0 225 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 SLC6A16Q9GZN6 736 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 STMN3Q9NZ72 180 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 OARD1Q9Y530 152 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 SLC22A7Q9Y694 548 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 NCKAP5O14513 1909 aa10.25□□□□□ -0.77
RNF4-212ENST00000509258 FREM3P0C091 2139 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 A0A0G2JN53 185 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 TCRBV9S1A1TA0A576 114 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 NCF1BA6NI72 391 aaPredicted RBP10.24□□□□□ -0.77
RNF4-212ENST00000509258 FAM159BA6NKW6 160 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 NCF1CA8MVU1 366 aaPredicted RBP10.24□□□□□ -0.77
RNF4-212ENST00000509258 SLC19A2O60779 497 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 NCF1P14598 390 aaPredicted RBP10.24□□□□□ -0.77
RNF4-212ENST00000509258 COX6B1P14854 86 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 ALOX12P18054 663 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 EPORP19235 508 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 HTR1EP28566 365 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 GRNP28799 593 aaKnown RBP10.24□□□□□ -0.77
RNF4-212ENST00000509258 HNRNPH1P31943 449 aaKnown RBP10.24□□□□□ -0.77
RNF4-212ENST00000509258 PAFAH1B1P43034 410 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 HNRNPFP52597 415 aaKnown RBP10.24□□□□□ -0.77
RNF4-212ENST00000509258 TAS2R50P59544 299 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 CSHL1Q14406 222 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 ABRAXAS2Q15018 415 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 MEP1AQ16819 746 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 ZNF630Q2M218 657 aaPredicted RBP10.24□□□□□ -0.77
RNF4-212ENST00000509258 SFT2D3Q587I9 215 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 ZNF468Q5VIY5 522 aaPredicted RBP10.24□□□□□ -0.77
RNF4-212ENST00000509258 PLAG1Q6DJT9 500 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 H3F3CQ6NXT2 135 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 PAPD4Q6PIY7 484 aaKnown RBP10.24□□□□□ -0.77
RNF4-212ENST00000509258 SYT10Q6XYQ8 523 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 SLCO4C1Q6ZQN7 724 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 CRLF3Q8IUI8 442 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 KLHDC8AQ8IYD2 350 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 EID3Q8N140 333 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 BEST3Q8N1M1 668 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 TMEM52Q8NDY8 209 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 PLPP5Q8NEB5 264 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 SIGLEC12Q96PQ1 595 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 LPAR4Q99677 370 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 RBBP8Q99708 897 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 PELI2Q9HAT8 420 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 KCNK13Q9HB14 408 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 WHRNQ9P202 907 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 SH3BGRL2Q9UJC5 107 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 ZFP69BQ9UJL9 534 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 PCDHGB6Q9Y5F9 930 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 CLDN16Q9Y5I7 305 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 PKDREJQ9NTG1 2253 aa10.24□□□□□ -0.77
RNF4-212ENST00000509258 FAM187AA6NFU0 413 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 A8MUI8 341 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 MAGEB17A8MXT2 336 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 ZNHIT1O43257 154 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 B4GALT2O60909 372 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 WDR47O94967 919 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 FHP07954 510 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 ESRRAP11474 423 aaPredicted RBP10.23□□□□□ -0.77
RNF4-212ENST00000509258 CD46P15529 392 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 CD1DP15813 335 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 POU3F2P20265 443 aaPredicted RBP10.23□□□□□ -0.77
RNF4-212ENST00000509258 CD22P20273 847 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 MAOAP21397 527 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 AHRP35869 848 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 SMSP52788 366 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 RIPPLY3P57055 190 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 CDKL1Q00532 357 aa10.23□□□□□ -0.77
RNF4-212ENST00000509258 ACTN3Q08043 901 aaPredicted RBP10.23□□□□□ -0.77
RNF4-212ENST00000509258 PWP1Q13610 501 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms