RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 RASL10AQ92737 203 aa4.29□□□□□ -1.72
GYPA-205ENST00000508337 RBM41Q96IZ5 413 aaKnown RBP4.29□□□□□ -1.72
GYPA-205ENST00000508337 PSMB7Q99436 277 aa4.29□□□□□ -1.72
GYPA-205ENST00000508337 FBXL4Q9UKA2 621 aa4.29□□□□□ -1.72
GYPA-205ENST00000508337 KNSTRNQ9Y448 316 aa4.29□□□□□ -1.72
GYPA-205ENST00000508337 SMAD5-AS1Q9Y6J3 95 aa4.29□□□□□ -1.72
GYPA-205ENST00000508337 ZHX2Q9Y6X8 837 aa4.29□□□□□ -1.72
GYPA-205ENST00000508337 A0A087WV48 116 aa4.28□□□□□ -1.72
GYPA-205ENST00000508337 CCDC69A6NI79 296 aa4.28□□□□□ -1.72
GYPA-205ENST00000508337 FAM86B1E9PN63 330 aa4.28□□□□□ -1.72
GYPA-205ENST00000508337 K7EQD1 137 aa4.28□□□□□ -1.72
GYPA-205ENST00000508337 SLC7A4O43246 635 aa4.28□□□□□ -1.72
GYPA-205ENST00000508337 POP4O95707 220 aaKnown RBP4.28□□□□□ -1.72
GYPA-205ENST00000508337 MOCS2O96007 188 aaPredicted RBP4.28□□□□□ -1.72
GYPA-205ENST00000508337 FAM86B2P0C5J1 330 aa4.28□□□□□ -1.72
GYPA-205ENST00000508337 KRT13P13646 458 aa4.28□□□□□ -1.72
GYPA-205ENST00000508337 P4HA1P13674 534 aa4.28□□□□□ -1.72
GYPA-205ENST00000508337 TCF4P15884 667 aa4.28□□□□□ -1.72
GYPA-205ENST00000508337 GOT1P17174 413 aa4.28□□□□□ -1.72
GYPA-205ENST00000508337 C4BPBP20851 252 aa4.28□□□□□ -1.72
GYPA-205ENST00000508337 ATP5DP30049 168 aa4.28□□□□□ -1.72
GYPA-205ENST00000508337 PKLRP30613 574 aa4.28□□□□□ -1.72
GYPA-205ENST00000508337 GP5P40197 560 aa4.28□□□□□ -1.72
GYPA-205ENST00000508337 MRPL28Q13084 256 aaKnown RBP4.28□□□□□ -1.72
GYPA-205ENST00000508337 IFT88Q13099 833 aa4.28□□□□□ -1.72
GYPA-205ENST00000508337 SRSF9Q13242 221 aaKnown RBP eCLIP4.28□□□□□ -1.72
GYPA-205ENST00000508337 KIAA0141Q14154 515 aaPredicted RBP4.28□□□□□ -1.72
GYPA-205ENST00000508337 TWISTNBQ3B726 338 aaPredicted RBP4.28□□□□□ -1.72
GYPA-205ENST00000508337 ZRANB3Q5FWF4 1079 aa4.28□□□□□ -1.72
GYPA-205ENST00000508337 RAB12Q6IQ22 244 aa4.28□□□□□ -1.72
GYPA-205ENST00000508337 TATDN1Q6P1N9 297 aa4.28□□□□□ -1.72
GYPA-205ENST00000508337 ALKBH5Q6P6C2 394 aaKnown RBP4.28□□□□□ -1.72
GYPA-205ENST00000508337 GPRIN3Q6ZVF9 776 aa4.28□□□□□ -1.72
GYPA-205ENST00000508337 ZFAND4Q86XD8 727 aa4.28□□□□□ -1.72
GYPA-205ENST00000508337 RNF130Q86XS8 419 aa4.28□□□□□ -1.72
GYPA-205ENST00000508337 OR8H3Q8N146 312 aa4.28□□□□□ -1.72
GYPA-205ENST00000508337 SPC24Q8NBT2 197 aa4.28□□□□□ -1.72
GYPA-205ENST00000508337 OR9Q2Q8NGE9 314 aa4.28□□□□□ -1.72
GYPA-205ENST00000508337 NCOA7Q8NI08 942 aa4.28□□□□□ -1.72
GYPA-205ENST00000508337 UBAC1Q9BSL1 405 aa4.28□□□□□ -1.72
GYPA-205ENST00000508337 PNNQ9H307 717 aaKnown RBP4.28□□□□□ -1.72
GYPA-205ENST00000508337 KCNK13Q9HB14 408 aa4.28□□□□□ -1.72
GYPA-205ENST00000508337 RAB9BQ9NP90 201 aa4.28□□□□□ -1.72
GYPA-205ENST00000508337 PHPT1Q9NRX4 125 aaPredicted RBP4.28□□□□□ -1.72
GYPA-205ENST00000508337 HPF1Q9NWY4 346 aa4.28□□□□□ -1.72
GYPA-205ENST00000508337 DBF4Q9UBU7 674 aaPredicted RBP4.28□□□□□ -1.72
GYPA-205ENST00000508337 C2orf92A0A1B0GVN3 265 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 NKX6-3A6NJ46 265 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 H0Y626 953 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 H3BMM5 538 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 KIF5CO60282 957 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 PRAF2O60831 178 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 FCGR3BO75015 233 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 SAP30O75446 220 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 STAM2O75886 525 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 RLN1P04808 185 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 SP9P0CG40 484 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 ADORA3P0DMS8 318 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 SHC1P29353 583 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 AKAP17AQ02040 695 aaKnown RBP4.27□□□□□ -1.73
GYPA-205ENST00000508337 TFCP2Q12800 502 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 TRA2AQ13595 282 aaKnown RBP eCLIP4.27□□□□□ -1.73
GYPA-205ENST00000508337 ZNF674Q2M3X9 581 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 SNAI3Q3KNW1 292 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 ODF2Q5BJF6 829 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 TXNRD3NBQ6F5E7 133 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 FAM166AQ6J272 317 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 SUSD1Q6UWL2 747 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 Q71RC1 249 aaPredicted RBP4.27□□□□□ -1.73
GYPA-205ENST00000508337 FAM131BQ86XD5 332 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 CATSPER3Q86XQ3 398 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 ZNF619Q8N2I2 560 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 SPATA18Q8TC71 538 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.27□□□□□ -1.73
GYPA-205ENST00000508337 ANP32BQ92688 251 aaKnown RBP4.27□□□□□ -1.73
GYPA-205ENST00000508337 TAF4BQ92750 862 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 CASP10Q92851 521 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 ST6GALNAC6Q969X2 333 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 NXPE2Q96DL1 559 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 TSGA13Q96PP4 275 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 CITED2Q99967 270 aaPredicted RBP4.27□□□□□ -1.73
GYPA-205ENST00000508337 OVOL2Q9BRP0 275 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 CHCHD5Q9BSY4 110 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 ALKBH7Q9BT30 221 aaPredicted RBP4.27□□□□□ -1.73
GYPA-205ENST00000508337 PI4K2AQ9BTU6 479 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 RAB11FIP5Q9BXF6 653 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 EDEM3Q9BZQ6 932 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 C2orf40Q9H1Z8 148 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 C10orf88Q9H8K7 445 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 CHCHD3Q9NX63 227 aaKnown RBP4.27□□□□□ -1.73
GYPA-205ENST00000508337 KLK11Q9UBX7 282 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 SH3BGRL2Q9UJC5 107 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 KLK13Q9UKR3 277 aa4.27□□□□□ -1.73
GYPA-205ENST00000508337 IGHV3OR16-10A0A075B7F0 116 aa4.26□□□□□ -1.73
GYPA-205ENST00000508337 TMEM110-MUSTN1A8MSY1 372 aa4.26□□□□□ -1.73
GYPA-205ENST00000508337 PRSS46E5RG02 174 aa4.26□□□□□ -1.73
GYPA-205ENST00000508337 NPIPA3F8WFD2 350 aa4.26□□□□□ -1.73
GYPA-205ENST00000508337 PI15O43692 258 aa4.26□□□□□ -1.73
GYPA-205ENST00000508337 SLU7O95391 586 aaKnown RBP4.26□□□□□ -1.73
GYPA-205ENST00000508337 FAM58BPP0C7Q3 252 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms