RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 MSX2P35548 267 aaPredicted RBP10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 MC3RP41968 323 aa10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 MRPS11P82912 194 aaKnown RBP10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 KRT33BQ14525 404 aa10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 MESDQ14696 234 aa10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 ZNF79Q15937 498 aa10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 LGALSLQ3ZCW2 172 aaPredicted RBP10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 GLYR1Q49A26 553 aaPredicted RBP10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 FAM69AQ5T7M9 428 aa10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 GLYATQ6IB77 296 aa10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 AFTPHQ6ULP2 937 aa10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 UQCC3Q6UW78 93 aa10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 LAYNQ6UX15 382 aa10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 SLC36A4Q6YBV0 504 aa10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 SPNS3Q6ZMD2 512 aa10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 SZRD1Q7Z422 152 aa10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 DCXRQ7Z4W1 244 aa10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 DDX53Q86TM3 631 aaKnown RBP10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 RASGEF1AQ8N9B8 481 aa10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 CPEB3Q8NE35 698 aaKnown RBP10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 OR10A7Q8NGE5 316 aa10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 SCARB1Q8WTV0 552 aa10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 ARMC5Q96C12 935 aa10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 ROPN1LQ96C74 230 aa10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 CELF6Q96J87 481 aaKnown RBP10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 C3orf30Q96M34 536 aa10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 ADPGKQ9BRR6 497 aa10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 YIPF4Q9BSR8 244 aa10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 CD244Q9BZW8 370 aa10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 PCDHAC1Q9H158 963 aa10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 SLC26A1Q9H2B4 701 aa10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 SARS2Q9NP81 518 aaKnown RBP10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 ZFP57Q9NU63 452 aa10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 FAM120CQ9NX05 1096 aaKnown RBP10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 SAGE1Q9NXZ1 904 aa10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 VAPAQ9P0L0 249 aa10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 SLC39A10Q9ULF5 831 aa10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 C5P01031 1676 aa10.43□□□□□ -0.74
PDLIM5-210ENST00000508216 CCDC195A0A1B0GUA6 201 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 A0A1W2PPQ1 181 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 KLRG2A4D1S0 409 aaPredicted RBP10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 F8VP50 259 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 NPC1O15118 1278 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 DHX15O43143 795 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 DLEU1O43261 78 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 KERAO60938 352 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 PIAS2O75928 621 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 CRYBA1P05813 215 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 ITGAVP06756 1048 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 GUSBP08236 651 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 CD3GP09693 182 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 STAG3L1P0CL83 205 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 DAOP14920 347 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 PPP2R1BP30154 601 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 HOXA9P31269 272 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 APOBEC3AP31941 199 aaPredicted RBP10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 PTPN7P35236 360 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 MAP2K3P46734 347 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 SNRPEP62304 92 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 PRKCZQ05513 592 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 MAP4K2Q12851 820 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 CTU2Q2VPK5 515 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 FNDC3BQ53EP0 1204 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 FAM182AQ5T1J6 154 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 ZNF691Q5VV52 312 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 CD276Q5ZPR3 534 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 SAXO2Q658L1 398 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 CYB5R2Q6BCY4 276 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 PPP1R18Q6NYC8 613 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 MBOAT1Q6ZNC8 495 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 C16orf59Q7L2K0 433 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 ADHFE1Q8IWW8 467 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 ARMC10Q8N2F6 343 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 OR10H5Q8NGA6 315 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 WDR20Q8TBZ3 569 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 ZNF564Q8TBZ8 553 aaPredicted RBP10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 C22orf15Q8WYQ4 148 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 MISP3Q96FF7 219 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 MRGPRX4Q96LA9 322 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 ERMAPQ96PL5 475 aaPredicted RBP10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 MCCC1Q96RQ3 725 aaPredicted RBP10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 WDR83Q9BRX9 315 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 GGACTQ9BVM4 153 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 SF3B5Q9BWJ5 86 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 TRIM54Q9BYV2 358 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 PNPOQ9NVS9 261 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 FAM118AQ9NWS6 357 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 ERVK13-1Q9NX77 482 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 APOBEC3BQ9UH17 382 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 KLK4Q9Y5K2 254 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 TCRBV9S1A1TA0A576 114 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 NEMP2A6NFY4 417 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 AHRRA9YTQ3 701 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 PTGES3LE9PB15 166 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 CYB561D2O14569 222 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 FADS1O60427 444 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 GATBO75879 557 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 GOSR1O95249 250 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 MAP3K8P41279 467 aa10.42□□□□□ -0.74
PDLIM5-210ENST00000508216 LSM3P62310 102 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms