RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 EDNRAP25101 427 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 MMP12P39900 470 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 SLC6A12P48065 614 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 IRX4P78413 519 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 AP1B1Q10567 949 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 RPA4Q13156 261 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 DRP2Q13474 957 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 GPR50Q13585 617 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 GRB14Q14449 540 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 ACKR1Q16570 336 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 C2orf76Q3KRA6 126 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 LRRC37A5PQ49AS3 106 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 FAM106AQ4KMX7 169 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 SPANXN4Q5MJ08 99 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 ATP1A1-AS1Q5TC04 95 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 SLC27A4Q6P1M0 643 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 C15orf52Q6ZUT6 534 aaKnown RBP2.95□□□□□ -1.94
LSM6-205ENST00000507449 SERPINA12Q8IW75 414 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 DND1Q8IYX4 353 aaKnown RBP2.95□□□□□ -1.94
LSM6-205ENST00000507449 TMEM99Q8N816 258 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 ADAD2Q8NCV1 583 aaKnown RBP2.95□□□□□ -1.94
LSM6-205ENST00000507449 OR6S1Q8NH40 331 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 MAPK15Q8TD08 544 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 ST7LQ8TDW4 575 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 SEPT8Q92599 483 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 OMA1Q96E52 524 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 C5orf30Q96GV9 206 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 ATP6V0BQ99437 205 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 OVOL2Q9BRP0 275 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 MRPL9Q9BYD2 267 aaKnown RBP2.95□□□□□ -1.94
LSM6-205ENST00000507449 ZDHHC6Q9H6R6 413 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 FBXW2Q9UKT8 454 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 ZNF510Q9Y2H8 683 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 SELENOKQ9Y6D0 94 aa2.95□□□□□ -1.94
LSM6-205ENST00000507449 TCF20Q9UGU0 1960 aaKnown RBP2.94□□□□□ -1.94
LSM6-205ENST00000507449 MEX3AA1L020 520 aaKnown RBP2.94□□□□□ -1.94
LSM6-205ENST00000507449 FAM149AA5PLN7 773 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 ANHXE9PGG2 379 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 M0R296 226 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 SLC1A7O00341 560 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 P2RX6O15547 441 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 CEACAM4O75871 244 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 DUS4LO95620 317 aaKnown RBP2.94□□□□□ -1.94
LSM6-205ENST00000507449 IGHEP01854 428 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 NUDT17P0C025 328 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 ZSCAN5DPP0CG00 497 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 PRKAR1AP10644 381 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 MYOGP15173 224 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 HLA-FP30511 346 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 SMSP52788 366 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 ATP12AP54707 1039 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 UBXN1Q04323 297 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 SLC34A1Q06495 639 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 SLC3A1Q07837 685 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 NPRL3Q12980 569 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 MSLNQ13421 630 aaPredicted RBP2.94□□□□□ -1.94
LSM6-205ENST00000507449 STXBP2Q15833 593 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 HLA-BQ31612 363 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 IFI44LQ53G44 452 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 FGD3Q5JSP0 725 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 PLPP4Q5VZY2 271 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 ZNF776Q68DI1 518 aaPredicted RBP2.94□□□□□ -1.94
LSM6-205ENST00000507449 TMEM126BQ8IUX1 230 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 SLC22A15Q8IZD6 547 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 OR2T6Q8NHC8 308 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 C11orf45Q8TAV5 145 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 ZNF519Q8TB69 540 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 MGARPQ8TDB4 240 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 SMPDL3AQ92484 453 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 GGHQ92820 318 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 SLC35C1Q96A29 364 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 BPIFA2Q96DR5 249 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 ART5Q96L15 291 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 PCDHB18PQ96TA0 734 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 ASCL2Q99929 193 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 NTMT1Q9BV86 223 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 ACAT2Q9BWD1 397 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 NACAP1Q9BZK3 213 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 TRIM7Q9C029 511 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 HOXD1Q9GZZ0 328 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 AKIRIN1Q9H9L7 192 aaPredicted RBP2.94□□□□□ -1.94
LSM6-205ENST00000507449 MAGEF1Q9HAY2 307 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 BARHL2Q9NY43 387 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 CYP39A1Q9NYL5 469 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 ASIC3Q9UHC3 531 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 PILRAQ9UKJ1 303 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 KCNK6Q9Y257 313 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 TEX264Q9Y6I9 313 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 CSNK1G3Q9Y6M4 447 aa2.94□□□□□ -1.94
LSM6-205ENST00000507449 TMEM129A0AVI4 362 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 DDX39AO00148 427 aaKnown RBP2.93□□□□□ -1.94
LSM6-205ENST00000507449 SURF4O15260 269 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 SIGLEC5O15389 551 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 KERAO60938 352 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 CLN5O75503 358 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 GRAP2O75791 330 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 STBD1O95210 358 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 C4BPBP20851 252 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 TEFQ10587 303 aa2.93□□□□□ -1.94
LSM6-205ENST00000507449 CNTN1Q12860 1018 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms