RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 MBD2Q9UBB5 411 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 ADAM21Q9UKJ8 722 aa4.95□□□□□ -1.62
NIPBL-204ENST00000504430 YBX2Q9Y2T7 364 aaKnown RBP4.95□□□□□ -1.62
NIPBL-204ENST00000504430 FLRT2O43155 660 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 COCHO43405 550 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 XRCC3O43542 346 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 GPX5O75715 221 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 CHRM5P08912 532 aaPredicted RBP4.94□□□□□ -1.62
NIPBL-204ENST00000504430 F3P13726 295 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 HOXB9P17482 250 aaPredicted RBP4.94□□□□□ -1.62
NIPBL-204ENST00000504430 YWHAQP27348 245 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 VAV2P52735 878 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 FPGSQ05932 587 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 ZRSR1Q15695 479 aaKnown RBP4.94□□□□□ -1.62
NIPBL-204ENST00000504430 SLC25A53Q5H9E4 307 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 PDZK1Q5T2W1 519 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 EXOC3L1Q86VI1 746 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 PARP8Q8N3A8 854 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 TTC9BQ8N6N2 239 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 AKAP1Q92667 903 aaKnown RBP eCLIP4.94□□□□□ -1.62
NIPBL-204ENST00000504430 MED30Q96HR3 178 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 CHST11Q9NPF2 352 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.94□□□□□ -1.62
NIPBL-204ENST00000504430 MAN2C1Q9NTJ4 1040 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 MRPL22Q9NWU5 206 aaKnown RBP4.94□□□□□ -1.62
NIPBL-204ENST00000504430 SMARCAL1Q9NZC9 954 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 B9D1Q9UPM9 204 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 RAXQ9Y2V3 346 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 ZNF541Q9H0D2 1346 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 C1orf232A0A0U1RR37 186 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 MATN2O00339 956 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 POLR1CO15160 346 aaPredicted RBP4.94□□□□□ -1.62
NIPBL-204ENST00000504430 OR6A2O95222 327 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 GPANK1O95872 356 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 ETFAP13804 333 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 ZNF28P17035 718 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 CTGFP29279 349 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 RGRP47804 291 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 FMO5P49326 533 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 FKBP1BP68106 108 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 DYRK1AQ13627 763 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 MOGAT2Q3SYC2 334 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 TWF2Q6IBS0 349 aaKnown RBP4.94□□□□□ -1.62
NIPBL-204ENST00000504430 CROCCP3Q8IVE0 287 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 TP53INP1Q96A56 240 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 WRAP53Q9BUR4 548 aaKnown RBP4.94□□□□□ -1.62
NIPBL-204ENST00000504430 IFT27Q9BW83 186 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 SGPP1Q9BX95 441 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 SLC40A1Q9NP59 571 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 RASD1Q9Y272 281 aa4.94□□□□□ -1.62
NIPBL-204ENST00000504430 OAS3Q9Y6K5 1087 aaKnown RBP4.94□□□□□ -1.62
NIPBL-204ENST00000504430 IQANK1A0A1B0GTG1 560 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 A0A1B0GUH1 482 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 CLDN4O14493 209 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 OR1F1O43749 312 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 MT-CYBP00156 380 aaPredicted RBP4.93□□□□□ -1.62
NIPBL-204ENST00000504430 MMP3P08254 477 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 ADRB1P08588 477 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 KRT19P08727 400 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 HSMCR30P0CW71 290 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 CMA1P23946 247 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 CRATP43155 626 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 BLKP51451 505 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 WDR5P61964 334 aaKnown RBP4.93□□□□□ -1.62
NIPBL-204ENST00000504430 NAE1Q13564 534 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 HSDL1Q3SXM5 330 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 ENPP7Q6UWV6 458 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 C16orf62Q7Z3J2 963 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 LINC00523Q86TU6 105 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 MUC20Q8N307 709 aaPredicted RBP4.93□□□□□ -1.62
NIPBL-204ENST00000504430 OR7G1Q8NGA0 311 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 FANK1Q8TC84 345 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 PIGCQ92535 297 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 MRPL53Q96EL3 112 aaKnown RBP4.93□□□□□ -1.62
NIPBL-204ENST00000504430 MARK4Q96L34 752 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 MS4A10Q96PG2 267 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 RASL10BQ96S79 203 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 DCLRE1BQ9H816 532 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 CHMP1AQ9HD42 196 aaPredicted RBP4.93□□□□□ -1.62
NIPBL-204ENST00000504430 CCNL1Q9UK58 526 aaPredicted RBP4.93□□□□□ -1.62
NIPBL-204ENST00000504430 SNX11Q9Y5W9 270 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 A0A087X0K7 114 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 A0A1B0GW15 77 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 ANKUB1A6NFN9 424 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 P2RY10O00398 339 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 NDUFS4O43181 175 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 GAPDHP04406 335 aaKnown RBP4.93□□□□□ -1.62
NIPBL-204ENST00000504430 RFPL3SP0C7P2 107 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 SPATA31C1P0DKV0 1188 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 GSTM3P21266 225 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 PDHA2P29803 388 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 MAT2AP31153 395 aaKnown RBP4.93□□□□□ -1.62
NIPBL-204ENST00000504430 GKP32189 559 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 NPBWR1P48145 328 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 ANXA11P50995 505 aaKnown RBP4.93□□□□□ -1.62
NIPBL-204ENST00000504430 TSPAN5P62079 268 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 JAG1P78504 1218 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 LGALS3BPQ08380 585 aa4.93□□□□□ -1.62
NIPBL-204ENST00000504430 HIST2H2ACQ16777 129 aaPredicted RBP4.93□□□□□ -1.62
NIPBL-204ENST00000504430 ST3GAL2Q16842 350 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms