RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 TSPAN19P0C672 248 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 CDH2P19022 906 aaPredicted RBP6.05□□□□□ -1.44
CLCN3-204ENST00000504131 EPORP19235 508 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 EPHX2P34913 555 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 MSX2P35548 267 aaPredicted RBP6.05□□□□□ -1.44
CLCN3-204ENST00000504131 HCAR3P49019 387 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 SIK1P57059 783 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 ETFDHQ16134 617 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 SLC22A6Q4U2R8 563 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 RNFT1Q5M7Z0 435 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 PRAMEF19Q5SWL8 479 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 CXorf57Q6NSI4 855 aaKnown RBP6.05□□□□□ -1.44
CLCN3-204ENST00000504131 DPPA4Q7L190 304 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 OTOP1Q7RTM1 612 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 SULF2Q8IWU5 870 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 SYNE4Q8N205 404 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 PCDH20Q8N6Y1 951 aaKnown RBP6.05□□□□□ -1.44
CLCN3-204ENST00000504131 NLGN2Q8NFZ4 835 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 OR6M1Q8NGM8 313 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 SCARB1Q8WTV0 552 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 FBXO17Q96EF6 278 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 LMF1Q96S06 567 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 ZFYVE21Q9BQ24 234 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 IL21RQ9HBE5 538 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 KLHL28Q9NXS3 571 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 PGAP2Q9UHJ9 254 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 NARFQ9UHQ1 456 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 GPR160Q9UJ42 338 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 ADGRB3O60242 1522 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 A0A1W2PRB8 838 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 ZNF729A6NN14 1252 aaPredicted RBP6.05□□□□□ -1.44
CLCN3-204ENST00000504131 FFAR2O15552 330 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 PDYNP01213 254 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 BMPR1AP36894 532 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 ACTR2P61160 394 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 ZNF763Q0D2J5 394 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 HIF1AQ16665 826 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 EIPR1Q53HC9 387 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 ACSBG2Q5FVE4 666 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 CDKAL1Q5VV42 579 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 YOD1Q5VVQ6 348 aaPredicted RBP6.05□□□□□ -1.44
CLCN3-204ENST00000504131 DHRSXQ8N5I4 330 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 UBAC2Q8NBM4 344 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 NDRG1Q92597 394 aaKnown RBP6.05□□□□□ -1.44
CLCN3-204ENST00000504131 PACRGQ96M98 296 aaPredicted RBP6.05□□□□□ -1.44
CLCN3-204ENST00000504131 ABHD1Q96SE0 405 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 RNF2Q99496 336 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 MVB12BQ9H7P6 319 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 AGO3Q9H9G7 860 aaKnown RBP6.05□□□□□ -1.44
CLCN3-204ENST00000504131 OBP2BQ9NPH6 170 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 MED17Q9NVC6 651 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 SLC7A11Q9UPY5 501 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 LIPT1Q9Y234 373 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 MEIS3P2A8K0S8 358 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 CCSO14618 274 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 EI24O14681 340 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 METTL18O95568 372 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 KLK3P07288 261 aaPredicted RBP6.05□□□□□ -1.44
CLCN3-204ENST00000504131 CD3GP09693 182 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 ZP3P21754 424 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 NAGLUP54802 743 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 NDUFA6P56556 154 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 AP1S1P61966 158 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 MRPL49Q13405 166 aaKnown RBP6.05□□□□□ -1.44
CLCN3-204ENST00000504131 GLRA4Q5JXX5 417 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 SLC22A10Q63ZE4 541 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 DYRK2Q92630 601 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 GTF3AQ92664 365 aaKnown RBP6.05□□□□□ -1.44
CLCN3-204ENST00000504131 MRPS31Q92665 395 aaKnown RBP6.05□□□□□ -1.44
CLCN3-204ENST00000504131 ATG4CQ96DT6 458 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 FOXN4Q96NZ1 517 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 RBM15Q96T37 977 aaKnown RBP eCLIP6.05□□□□□ -1.446e-7■■■□□ 17.5
CLCN3-204ENST00000504131 PARK7Q99497 189 aaKnown RBP6.05□□□□□ -1.44
CLCN3-204ENST00000504131 MROQ9BYG7 248 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 ROPN1BQ9BZX4 212 aaPredicted RBP6.05□□□□□ -1.44
CLCN3-204ENST00000504131 ROPN1Q9HAT0 212 aaPredicted RBP6.05□□□□□ -1.44
CLCN3-204ENST00000504131 SMURF2Q9HAU4 748 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.05□□□□□ -1.44
CLCN3-204ENST00000504131 MARK1Q9P0L2 795 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 CTSFQ9UBX1 484 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 SYNMO15061 1565 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 PFASO15067 1338 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 IRS2Q9Y4H2 1338 aa6.05□□□□□ -1.44
CLCN3-204ENST00000504131 OVOS2A0A0G2JMS6 1433 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 OVOS2A0A0J9YW53 1432 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 OVOS2Q6IE36 1432 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 SOBPA7XYQ1 873 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 OR7A17O14581 309 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 TPP1O14773 563 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 PIP5K1BO14986 540 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 SCN2BO60939 215 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 HLA-DOAP06340 250 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 PLA2G4BP0C869 781 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 THRBP10828 461 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 NID1P14543 1247 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 CMA1P23946 247 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 MYL9P24844 172 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 HNRNPH3P31942 346 aaKnown RBP6.04□□□□□ -1.44
CLCN3-204ENST00000504131 GPLD1P80108 840 aa6.04□□□□□ -1.44
CLCN3-204ENST00000504131 LRRC32Q14392 662 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms