RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 OR10Q1Q8NGQ4 319 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 BBS10Q8TAM1 723 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 RAB7BQ96AH8 199 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 TEPSINQ96N21 525 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 ASPNQ9BXN1 380 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 CHIAQ9BZP6 476 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 METTL21EPA6NDL7 271 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 NPIPA5E9PKD4 350 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 J3QLW9 94 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 LEFTY1O75610 366 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 KAT7O95251 611 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 PGAM2P15259 253 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 ZNF19P17023 458 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 EDNRBP24530 442 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 GKP32189 559 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 MOGQ16653 247 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 C1orf220Q5T0J3 134 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 ASB18Q6ZVZ8 466 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 TREML1Q86YW5 311 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 GNPDA2Q8TDQ7 276 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 HDAC2Q92769 488 aaKnown RBP15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 SHDQ96IW2 340 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 SLC45A3Q96JT2 553 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 NPIPA1Q9UND3 350 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 BEST1O76090 585 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 GJB5O95377 273 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 CH25HO95992 272 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 F8A1P23610 371 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 SOX4Q06945 474 aaPredicted RBP15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 ZNF404Q494X3 552 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 C4orf46Q504U0 113 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 STEAP4Q687X5 459 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 ALG1LQ6GMV1 187 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 ZNF598Q86UK7 904 aaKnown RBP15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 C12orf40Q86WS4 652 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 OR5P2Q8WZ92 322 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 SCGB3A2Q96PL1 93 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 SMG9Q9H0W8 520 aaKnown RBP15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 EXOSC1Q9Y3B2 195 aaKnown RBP15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 PCDHGB2Q9Y5G2 931 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 CPED1A4D0V7 1026 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 CDRT1O95170 752 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 HLA-EP13747 358 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 ITIH1P19827 911 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 HTR1EP28566 365 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 RBM34P42696 430 aaKnown RBP15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 SLC3A1Q07837 685 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 CD47Q08722 323 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 ABCA11PQ4W5N1 156 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 ANKRD26P1Q6NSI1 321 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 ERN2Q76MJ5 926 aaKnown RBP15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 GLYATL1Q969I3 302 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 IGSF8Q969P0 613 aa15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 C12orf43Q96C57 262 aaKnown RBP15.96■□□□□ 0.15
PCDHA1-203ENST00000504120 DFNA5O60443 496 aa15.96■□□□□ 0.14
PCDHA1-203ENST00000504120 SCGNO76038 276 aa15.96■□□□□ 0.14
PCDHA1-203ENST00000504120 SLC35E2BP0CK96 405 aa15.96■□□□□ 0.14
PCDHA1-203ENST00000504120 C1GALT1C1LP0DN25 315 aa15.96■□□□□ 0.14
PCDHA1-203ENST00000504120 GATMP50440 423 aa15.96■□□□□ 0.14
PCDHA1-203ENST00000504120 SLC10A2Q12908 348 aaPredicted RBP15.96■□□□□ 0.14
PCDHA1-203ENST00000504120 ZNF782Q6ZMW2 699 aaPredicted RBP15.96■□□□□ 0.14
PCDHA1-203ENST00000504120 FAM83CQ9BQN1 747 aa15.96■□□□□ 0.14
PCDHA1-203ENST00000504120 RNF121Q9H920 327 aa15.96■□□□□ 0.14
PCDHA1-203ENST00000504120 CYTH4Q9UIA0 394 aa15.96■□□□□ 0.14
PCDHA1-203ENST00000504120 PCDHGB6Q9Y5F9 930 aa15.96■□□□□ 0.14
PCDHA1-203ENST00000504120 RPP14O95059 124 aaKnown RBP15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 SOX14O95416 240 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 HRH2P25021 359 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 CDKN1CP49918 316 aaPredicted RBP15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 PITX1P78337 314 aaPredicted RBP15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 ARHGAP40Q5TG30 622 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 CHERPQ8IWX8 916 aaKnown RBP15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 OR4K1Q8NGD4 311 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 ZNF420Q8TAQ5 688 aaPredicted RBP15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 DPAGT1Q9H3H5 408 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 SPHK2Q9NRA0 654 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 MS4A12Q9NXJ0 267 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 PCDHB3Q9Y5E6 796 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 GMEB1Q9Y692 573 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 B4GALT2O60909 372 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 GPR32O75388 356 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 NRIP1P48552 1158 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 GRIK2Q13002 908 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 MPP2Q14168 576 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 INAVAQ3KP66 663 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 UNC50Q53HI1 259 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 RASGRP3Q8IV61 690 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 RASGEF1AQ8N9B8 481 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 THRSPQ92748 146 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 TAS2R9Q9NYW1 312 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 IFT52Q9Y366 437 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 CFIP05156 583 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 C7P10643 843 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 GP1BBP13224 206 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 MAPK3P27361 379 aaPredicted RBP15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 LMAN2Q12907 356 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 TBC1D25Q3MII6 688 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 MAMDC4Q6UXC1 1216 aa15.95■□□□□ 0.14
PCDHA1-203ENST00000504120 AMIGO1Q86WK6 493 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms