RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 CHSY3Q70JA7 882 aa10.16□□□□□ -0.78
UBE2D3-212ENST00000502563 APOBEC4Q8WW27 367 aaKnown RBP10.16□□□□□ -0.78
UBE2D3-212ENST00000502563 MMABQ96EY8 250 aaPredicted RBP10.16□□□□□ -0.78
UBE2D3-212ENST00000502563 ZIM3Q96PE6 472 aa10.16□□□□□ -0.78
UBE2D3-212ENST00000502563 TMEM237Q96Q45 408 aa10.16□□□□□ -0.78
UBE2D3-212ENST00000502563 CENPKQ9BS16 269 aa10.16□□□□□ -0.78
UBE2D3-212ENST00000502563 TBCDQ9BTW9 1192 aa10.16□□□□□ -0.78
UBE2D3-212ENST00000502563 SLC29A3Q9BZD2 475 aa10.16□□□□□ -0.78
UBE2D3-212ENST00000502563 IQCGQ9H095 443 aaKnown RBP10.16□□□□□ -0.78
UBE2D3-212ENST00000502563 NOL11Q9H8H0 719 aaKnown RBP10.16□□□□□ -0.78
UBE2D3-212ENST00000502563 BRF2Q9HAW0 419 aa10.16□□□□□ -0.78
UBE2D3-212ENST00000502563 LOC102723996A0A087X1L8 192 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 A0A0A6YYC8 382 aaPredicted RBP10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 TLDC2A0PJX2 215 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 SMIM23A6NLE4 172 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 I3L1I5 382 aaPredicted RBP10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 AGPSO00116 658 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 TM9SF1O15321 606 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 NKX2-8O15522 239 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 SNUPNO95149 360 aaKnown RBP10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 ESRRBO95718 433 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 ENO1P06733 434 aaKnown RBP10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 CPA3P15088 417 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 JAK1P23458 1154 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 PTX3P26022 381 aaPredicted RBP10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 ETV4P43268 484 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 OR1D4P47884 311 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 IL10RAQ13651 578 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 TUBB8Q3ZCM7 444 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 UNC50Q53HI1 259 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 MLIPQ5VWP3 458 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 KHDRBS2Q5VWX1 349 aaKnown RBP10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 FRG2Q64ET8 278 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 ABHD17CQ6PCB6 329 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 TMEM205Q6UW68 189 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 FRMD7Q6ZUT3 714 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 MRGPREQ86SM8 312 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 PDSS2Q86YH6 399 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 HPS6Q86YV9 775 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 ZC3H7AQ8IWR0 971 aaKnown RBP10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 SRRM1Q8IYB3 904 aaKnown RBP10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 ZCCHC7Q8N3Z6 543 aaKnown RBP10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 PLPP5Q8NEB5 264 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 OR52B6Q8NGF0 335 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 OR9A4Q8NGU2 314 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 OR51Q1Q8NH59 317 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 HUS1BQ8NHY5 278 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 COL26A1Q96A83 441 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 MIEF2Q96C03 454 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 MOCOSQ96EN8 888 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 METTL2AQ96IZ6 378 aaKnown RBP10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 FER1L6-AS2Q96M78 137 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 QRFPRQ96P65 431 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 FRG2BQ96QU4 278 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 SERINC2Q96SA4 455 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 RUFY1Q96T51 708 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 AICDAQ9GZX7 198 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 VIPAS39Q9H9C1 493 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 LYRM4Q9HD34 91 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 RRAGDQ9NQL2 400 aaPredicted RBP10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 DMRT3Q9NQL9 472 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 PRDM9Q9NQV7 894 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 ARGLU1Q9NWB6 273 aaPredicted RBP10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 TRPC4Q9UBN4 977 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 CTSFQ9UBX1 484 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 ADAM29Q9UKF5 820 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 LHX6Q9UPM6 363 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 MRPS2Q9Y399 296 aaKnown RBP10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 PTRH2Q9Y3E5 179 aaKnown RBP10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 NAALAD2Q9Y3Q0 740 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 PCDHGB7Q9Y5F8 929 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 PCDHGA9Q9Y5G4 932 aaKnown RBP10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 MRPS18BQ9Y676 258 aaKnown RBP10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 KCNMB2Q9Y691 235 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 MGAQ8IWI9 3026 aa10.15□□□□□ -0.78
UBE2D3-212ENST00000502563 FAM208BQ5VWN6 2430 aa10.15□□□□□ -0.79
UBE2D3-212ENST00000502563 ITPR1Q14643 2758 aa10.14□□□□□ -0.79
UBE2D3-212ENST00000502563 LRRC14BA6NHZ5 514 aa10.14□□□□□ -0.79
UBE2D3-212ENST00000502563 IDSB3KWA1 339 aa10.14□□□□□ -0.79
UBE2D3-212ENST00000502563 NPIPB8E9PQR5 432 aa10.14□□□□□ -0.79
UBE2D3-212ENST00000502563 CDK2AP1O14519 115 aa10.14□□□□□ -0.79
UBE2D3-212ENST00000502563 ATXN7O15265 892 aaPredicted RBP10.14□□□□□ -0.79
UBE2D3-212ENST00000502563 TRIM13O60858 407 aa10.14□□□□□ -0.79
UBE2D3-212ENST00000502563 CEACAM4O75871 244 aa10.14□□□□□ -0.79
UBE2D3-212ENST00000502563 SUPT7LO94864 414 aa10.14□□□□□ -0.79
UBE2D3-212ENST00000502563 MYZAPP0CAP1 466 aa10.14□□□□□ -0.79
UBE2D3-212ENST00000502563 ZNF888P0CJ79 500 aaPredicted RBP10.14□□□□□ -0.79
UBE2D3-212ENST00000502563 H2AFXP16104 143 aaPredicted RBP10.14□□□□□ -0.79
UBE2D3-212ENST00000502563 IL1RNP18510 177 aa10.14□□□□□ -0.79
UBE2D3-212ENST00000502563 HNRNPH1P31943 449 aaKnown RBP10.14□□□□□ -0.79
UBE2D3-212ENST00000502563 CCR10P46092 362 aa10.14□□□□□ -0.79
UBE2D3-212ENST00000502563 MTTPP55157 894 aa10.14□□□□□ -0.79
UBE2D3-212ENST00000502563 AP2B1P63010 937 aa10.14□□□□□ -0.79
UBE2D3-212ENST00000502563 KLC1Q07866 573 aa10.14□□□□□ -0.79
UBE2D3-212ENST00000502563 PCLAFQ15004 111 aa10.14□□□□□ -0.79
UBE2D3-212ENST00000502563 DEFB134Q4QY38 66 aa10.14□□□□□ -0.79
UBE2D3-212ENST00000502563 CEP85LQ5SZL2 805 aa10.14□□□□□ -0.79
UBE2D3-212ENST00000502563 C16orf46Q6P387 395 aa10.14□□□□□ -0.79
UBE2D3-212ENST00000502563 QSOX2Q6ZRP7 698 aa10.14□□□□□ -0.79
UBE2D3-212ENST00000502563 MILR1Q7Z6M3 343 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms