RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 PYURFQ96I23 114 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 RPL10LQ96L21 214 aaKnown RBP3.78□□□□□ -1.8
CLTC-209ENST00000498711 YME1L1Q96TA2 773 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 KATNAL1Q9BW62 490 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 TTLL2Q9BWV7 592 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 GABARAPL3Q9BY60 117 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 FAM49AQ9H0Q0 323 aaPredicted RBP3.78□□□□□ -1.8
CLTC-209ENST00000498711 ARMC7Q9H6L4 198 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 TM9SF3Q9HD45 589 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 TRNAU1APQ9NX07 287 aaKnown RBP3.78□□□□□ -1.8
CLTC-209ENST00000498711 VNN3Q9NY84 501 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 CCDC59Q9P031 241 aaKnown RBP3.78□□□□□ -1.8
CLTC-209ENST00000498711 OPTCQ9UBM4 332 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 C3orf18Q9UK00 162 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 BAG5Q9UL15 447 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 TRAPPC4Q9Y296 219 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 CRYL1Q9Y2S2 319 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 TIMM22Q9Y584 194 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 ARL5AQ9Y689 179 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 A0A0A6YYJ9 748 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 C1orf232A0A0U1RR37 186 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 ELOVL7A1L3X0 281 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 SUPT3HB4E1H0 165 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 H3BUI4 141 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 FFAR2O15552 330 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 NUAK1O60285 661 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 CREG1O75629 220 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 UPK1BO75841 260 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 RHOBTB1O94844 696 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 CSTBP04080 98 aaKnown RBP3.78□□□□□ -1.8
CLTC-209ENST00000498711 PFKLP17858 780 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 GABRB1P18505 474 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 LORP23490 312 aaPredicted RBP3.78□□□□□ -1.8
CLTC-209ENST00000498711 PTGER3P43115 390 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 HTR6P50406 440 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 CPT1AP50416 773 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 CLDN8P56748 225 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 OCA2Q04671 838 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 PRKCDQ05655 676 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 ZNF33BQ06732 778 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 MAD2L1BPQ15013 274 aaPredicted RBP3.78□□□□□ -1.8
CLTC-209ENST00000498711 RPS6KA2Q15349 733 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 NPTX1Q15818 432 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 KCNJ8Q15842 424 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 NDUFA5Q16718 116 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 GGTA1PQ4G0N0 100 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 ATP6AP1LQ52LC2 224 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 CARD16Q5EG05 197 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 TMEM53Q6P2H8 277 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 SBSNQ6UWP8 590 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 ZNF551Q7Z340 670 aaPredicted RBP3.78□□□□□ -1.8
CLTC-209ENST00000498711 GOLGA7Q7Z5G4 137 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 STK32CQ86UX6 486 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 RALGPS2Q86X27 583 aaPredicted RBP3.78□□□□□ -1.8
CLTC-209ENST00000498711 ARMC8Q8IUR7 673 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 SETD9Q8NE22 299 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 TRPV1Q8NER1 839 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 PHOSPHO2Q8TCD6 241 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 APH1BQ8WW43 257 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 SLC13A3Q8WWT9 602 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 TESCQ96BS2 214 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 MISP3Q96FF7 219 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 SPATA17Q96L03 361 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 SAMD11Q96NU1 681 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 KLHL5Q96PQ7 755 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 PSKH2Q96QS6 385 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 GAD1Q99259 594 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 GPR21Q99679 349 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 SLC29A3Q9BZD2 475 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 POLR1EQ9GZS1 481 aaKnown RBP3.78□□□□□ -1.8
CLTC-209ENST00000498711 SIK2Q9H0K1 926 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 MAGEH1Q9H213 219 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 CHST8Q9H2A9 424 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 MMP27Q9H306 513 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 IKZF5Q9H5V7 419 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 ACTR8Q9H981 624 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 MOV10Q9HCE1 1003 aaKnown RBP3.78□□□□□ -1.8
CLTC-209ENST00000498711 PLXNA4Q9HCM2 1894 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 CCNB1IP1Q9NPC3 277 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 ACOT13Q9NPJ3 140 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 SEMA4BQ9NPR2 832 aaPredicted RBP3.78□□□□□ -1.8
CLTC-209ENST00000498711 OLA1Q9NTK5 396 aaKnown RBP3.78□□□□□ -1.8
CLTC-209ENST00000498711 TDP1Q9NUW8 608 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.78□□□□□ -1.8
CLTC-209ENST00000498711 ELOVL2Q9NXB9 296 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 KCMF1Q9P0J7 381 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 ERVK-18Q9QC07 812 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 TBX21Q9UL17 535 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 AGO1Q9UL18 857 aaKnown RBP3.78□□□□□ -1.8
CLTC-209ENST00000498711 ST3GAL5Q9UNP4 418 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 IFT52Q9Y366 437 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 TPRKBQ9Y3C4 175 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 OARD1Q9Y530 152 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 NUP205Q92621 2012 aa3.78□□□□□ -1.8
CLTC-209ENST00000498711 FITM1A5D6W6 292 aa3.77□□□□□ -1.81
CLTC-209ENST00000498711 NPEPPSL1A6NEC2 478 aa3.77□□□□□ -1.81
CLTC-209ENST00000498711 SAGE2PA6NJ88 616 aa3.77□□□□□ -1.81
CLTC-209ENST00000498711 AGAP14A8MT82 685 aa3.77□□□□□ -1.81
CLTC-209ENST00000498711 NOTOA8MTQ0 251 aa3.77□□□□□ -1.81
CLTC-209ENST00000498711 C9JVG2 144 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms