RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 TIGD4Q8IY51 512 aa2.73□□□□□ -1.97
SMC4-227ENST00000497984 CCDC185Q8N715 623 aa2.73□□□□□ -1.97
SMC4-227ENST00000497984 OR5M9Q8NGP3 310 aa2.73□□□□□ -1.97
SMC4-227ENST00000497984 KLK11Q9UBX7 282 aa2.73□□□□□ -1.97
SMC4-227ENST00000497984 BAIAP2L1Q9UHR4 511 aa2.73□□□□□ -1.97
SMC4-227ENST00000497984 AGTPBP1Q9UPW5 1226 aa2.73□□□□□ -1.97
SMC4-227ENST00000497984 NTNG1Q9Y2I2 539 aa2.73□□□□□ -1.97
SMC4-227ENST00000497984 FER1L5A0AVI2 2057 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 ANXA2P2A6NMY6 339 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 NPIPA3F8WFD2 350 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 HAT1O14929 419 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 ECE2O60344 883 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 PLOD3O60568 738 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 DNTTP04053 509 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 STAG3L1P0CL83 205 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 KRT3P12035 628 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 DUTP33316 252 aaKnown RBP2.72□□□□□ -1.97
SMC4-227ENST00000497984 NAGLUP54802 743 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 ALDH1L2Q3SY69 923 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 LRRC73Q5JTD7 316 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 ATAD3CQ5T2N8 411 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 OLFML2AQ68BL7 652 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 CLEC4GQ6UXB4 293 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 PPP1R21Q6ZMI0 780 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 ADCK2Q7Z695 626 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 PHLDB2Q86SQ0 1253 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 C4orf32Q8N8J7 132 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 IQUBQ8NA54 791 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 OR9Q2Q8NGE9 314 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 OR52B6Q8NGF0 335 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 RPLP0P6Q8NHW5 317 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 SPPL2AQ8TCT8 520 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 AGAP11Q8TF27 550 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 MRPS27Q92552 414 aaKnown RBP2.72□□□□□ -1.97
SMC4-227ENST00000497984 RAD54LQ92698 747 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 RBM41Q96IZ5 413 aaKnown RBP2.72□□□□□ -1.97
SMC4-227ENST00000497984 OCR1Q9BZK8 76 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 UBQLN3Q9H347 655 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 C10orf88Q9H8K7 445 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 POLKQ9UBT6 870 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 MRPS18CQ9Y3D5 142 aaKnown RBP2.72□□□□□ -1.97
SMC4-227ENST00000497984 NAALAD2Q9Y3Q0 740 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 HEG1Q9ULI3 1381 aa2.72□□□□□ -1.97
SMC4-227ENST00000497984 NEDD4P46934 1319 aa2.71□□□□□ -1.98
SMC4-227ENST00000497984 TMEM129A0AVI4 362 aa2.71□□□□□ -1.98
SMC4-227ENST00000497984 FAM168BA1KXE4 195 aa2.71□□□□□ -1.98
SMC4-227ENST00000497984 TSPY2A6NKD2 308 aa2.71□□□□□ -1.98
SMC4-227ENST00000497984 CDX4O14627 284 aaPredicted RBP2.71□□□□□ -1.98
SMC4-227ENST00000497984 TNFSF12O43508 249 aa2.71□□□□□ -1.98
SMC4-227ENST00000497984 SH3BGRLO75368 114 aa2.71□□□□□ -1.98
SMC4-227ENST00000497984 RENP00797 406 aa2.71□□□□□ -1.98
SMC4-227ENST00000497984 RPLP0P05388 317 aaKnown RBP2.71□□□□□ -1.98
SMC4-227ENST00000497984 MGMTP16455 207 aa2.71□□□□□ -1.98
SMC4-227ENST00000497984 BDNFP23560 247 aa2.71□□□□□ -1.98
SMC4-227ENST00000497984 GIFP27352 417 aa2.71□□□□□ -1.98
SMC4-227ENST00000497984 CRYBA2P53672 197 aa2.71□□□□□ -1.98
SMC4-227ENST00000497984 NDUFV3P56181 108 aaKnown RBP2.71□□□□□ -1.98
SMC4-227ENST00000497984 SRPXP78539 464 aa2.71□□□□□ -1.98
SMC4-227ENST00000497984 TOMM20Q15388 145 aa2.71□□□□□ -1.98
SMC4-227ENST00000497984 Q1RN00 199 aa2.71□□□□□ -1.98
SMC4-227ENST00000497984 SPANXN4Q5MJ08 99 aa2.71□□□□□ -1.98
SMC4-227ENST00000497984 MOXD1Q6UVY6 613 aa2.71□□□□□ -1.98
SMC4-227ENST00000497984 COX8CQ7Z4L0 72 aa2.71□□□□□ -1.98
SMC4-227ENST00000497984 TEX26Q8N6G2 289 aa2.71□□□□□ -1.98
SMC4-227ENST00000497984 CCDC191Q8NCU4 936 aa2.71□□□□□ -1.98
SMC4-227ENST00000497984 NCOA7Q8NI08 942 aa2.71□□□□□ -1.98
SMC4-227ENST00000497984 SNRNP27Q8WVK2 155 aaKnown RBP2.71□□□□□ -1.98
SMC4-227ENST00000497984 VPS33AQ96AX1 596 aa2.71□□□□□ -1.98
SMC4-227ENST00000497984 NXPE2Q96DL1 559 aa2.71□□□□□ -1.98
SMC4-227ENST00000497984 CNDP2Q96KP4 475 aaKnown RBP2.71□□□□□ -1.98
SMC4-227ENST00000497984 AK8Q96MA6 479 aa2.71□□□□□ -1.98
SMC4-227ENST00000497984 NEDD4LQ96PU5 975 aa2.71□□□□□ -1.98
SMC4-227ENST00000497984 MGME1Q9BQP7 344 aa2.71□□□□□ -1.98
SMC4-227ENST00000497984 PAPOLGQ9BWT3 736 aaKnown RBP2.71□□□□□ -1.98
SMC4-227ENST00000497984 ANKRD2Q9GZV1 360 aa2.71□□□□□ -1.98
SMC4-227ENST00000497984 OR10A4Q9H209 315 aa2.71□□□□□ -1.98
SMC4-227ENST00000497984 TRAV18A0A075B6X5 111 aa2.7□□□□□ -1.98
SMC4-227ENST00000497984 ARHGEF33A8MVX0 844 aa2.7□□□□□ -1.98
SMC4-227ENST00000497984 MAGEB2O15479 319 aa2.7□□□□□ -1.98
SMC4-227ENST00000497984 FLRT2O43155 660 aa2.7□□□□□ -1.98
SMC4-227ENST00000497984 FIBPO43427 364 aa2.7□□□□□ -1.98
SMC4-227ENST00000497984 DIAPH2O60879 1101 aa2.7□□□□□ -1.98
SMC4-227ENST00000497984 TCF4P15884 667 aa2.7□□□□□ -1.98
SMC4-227ENST00000497984 PTAFRP25105 342 aa2.7□□□□□ -1.98
SMC4-227ENST00000497984 GMPSP49915 693 aaPredicted RBP2.7□□□□□ -1.98
SMC4-227ENST00000497984 ZNF41P51814 821 aaPredicted RBP2.7□□□□□ -1.98
SMC4-227ENST00000497984 TNK1Q13470 666 aa2.7□□□□□ -1.98
SMC4-227ENST00000497984 CAMK2DQ13557 499 aa2.7□□□□□ -1.98
SMC4-227ENST00000497984 RUNX3Q13761 415 aa2.7□□□□□ -1.98
SMC4-227ENST00000497984 PPA1Q15181 289 aa2.7□□□□□ -1.98
SMC4-227ENST00000497984 TAZQ16635 292 aa2.7□□□□□ -1.98
SMC4-227ENST00000497984 CDO1Q16878 200 aa2.7□□□□□ -1.98
SMC4-227ENST00000497984 TWISTNBQ3B726 338 aaPredicted RBP2.7□□□□□ -1.98
SMC4-227ENST00000497984 AGAP7PQ5VUJ5 663 aa2.7□□□□□ -1.98
SMC4-227ENST00000497984 DHRS11Q6UWP2 260 aa2.7□□□□□ -1.98
SMC4-227ENST00000497984 DNAJB7Q7Z6W7 309 aaPredicted RBP2.7□□□□□ -1.98
SMC4-227ENST00000497984 CARM1Q86X55 608 aa2.7□□□□□ -1.98
SMC4-227ENST00000497984 CATSPER3Q86XQ3 398 aa2.7□□□□□ -1.98
SMC4-227ENST00000497984 HSCBQ8IWL3 235 aa2.7□□□□□ -1.98
SMC4-227ENST00000497984 DND1Q8IYX4 353 aaKnown RBP2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms