RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 KRTCAP3Q53RY4 240 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 SPINK14Q6IE38 97 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 MYO7BQ6PIF6 2116 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 RPTNQ6XPR3 784 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 QSOX2Q6ZRP7 698 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 ZC3HC1Q86WB0 502 aaKnown RBP11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 RPS19BP1Q86WX3 136 aaKnown RBP11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 TICAM1Q8IUC6 712 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 MDS2Q8NDY4 140 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 FBXO36Q8NEA4 188 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 UTP15Q8TED0 518 aaKnown RBP11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 MAGED4Q96JG8 741 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 SIGLEC12Q96PQ1 595 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 TRIM51Q9BSJ1 452 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 TRIM31Q9BZY9 425 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 SLC6A16Q9GZN6 736 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 SPNS1Q9H2V7 528 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 CDCP1Q9H5V8 836 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 GRPEL1Q9HAV7 217 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 CTNNAL1Q9UBT7 734 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 SH3BGRL2Q9UJC5 107 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 OARD1Q9Y530 152 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 SAR1BQ9Y6B6 198 aa11.04□□□□□ -0.64
NUDCD3-211ENST00000497978 EFCAB8A8MWE9 144 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 SLC19A2O60779 497 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 SEC31AO94979 1220 aaKnown RBP11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 B3GALT4O96024 378 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 SP1P08047 785 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 SERPINA6P08185 405 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 ESRRAP11474 423 aaPredicted RBP11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 GNAZP19086 355 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 RAB8AP61006 207 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 STXBP1P61764 594 aaKnown RBP11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 GNG11P61952 73 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 BTG2P78543 158 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 GUCA2AQ02747 115 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 SRSF11Q05519 484 aaKnown RBP11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 TOR1AIP1Q5JTV8 583 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 SLC25A25Q6KCM7 469 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 MRGPRGQ86SM5 289 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 ADAMTSL2Q86TH1 951 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 CREG2Q8IUH2 290 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 ZNF808Q8N4W9 903 aaPredicted RBP11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 ANKRD53Q8N9V6 530 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 BBOF1Q8ND07 529 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 TTLQ8NG68 377 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 ELP5Q8TE02 316 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 THAP3Q8WTV1 239 aaPredicted RBP11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 ITLN2Q8WWU7 325 aaPredicted RBP11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 SCMH1Q96GD3 660 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 CCDC120Q96HB5 630 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 FAR2Q96K12 515 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 NPAS2Q99743 824 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 NAPGQ99747 312 aaPredicted RBP11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 WDR83Q9BRX9 315 aaKnown RBP11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 RHBGQ9H310 441 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 KCNF1Q9H3M0 494 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 GPAMQ9HCL2 828 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 PRDM9Q9NQV7 894 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 MOCS1Q9NZB8 636 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 LRFN1Q9P244 771 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 IKZF3Q9UKT9 509 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 KLF2Q9Y5W3 355 aaPredicted RBP11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 PSAT1Q9Y617 370 aa11.03□□□□□ -0.64
NUDCD3-211ENST00000497978 A0A088AWK7 358 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 ASPDHA6ND91 283 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 SAGE2PA6NJ88 616 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 FCHO1O14526 889 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 MAN1A2O60476 641 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 DNAJB6O75190 326 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 WDR47O94967 919 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 SMIM10L1P0DMW3 83 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 C1GALT1C1LP0DN25 315 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 MAOAP21397 527 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 ZNF10P21506 573 aaPredicted RBP11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 HPDP32754 393 aaPredicted RBP11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 CYB561P49447 251 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 ST13P50502 369 aaKnown RBP11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 TAS2R39P59534 338 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 BTN3A2P78410 334 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 ZNF460Q14592 562 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 TSNQ15631 228 aaKnown RBP11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 MAPKAPK3Q16644 382 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 GALNTL5Q7Z4T8 443 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 ZBED8Q8IZ13 594 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 KRT78Q8N1N4 520 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 KIF2BQ8N4N8 673 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 CREB3L4Q8TEY5 395 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 CCT6BQ92526 530 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 TMEM125Q96AQ2 219 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 SMIM10Q96HG1 83 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 GPR137Q96N19 417 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 CAPS2Q9BXY5 557 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 HES7Q9BYE0 225 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 RHOJQ9H4E5 214 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 KLHL31Q9H511 634 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 POPDC3Q9HBV1 291 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 CHST11Q9NPF2 352 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 TXNDC16Q9P2K2 825 aa11.02□□□□□ -0.65
NUDCD3-211ENST00000497978 RNF14Q9UBS8 474 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms