RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 SPRTNQ9H040 489 aaPredicted RBP23.07■■□□□ 1.28
TNFRSF4-203ENST00000497869 PLCL2Q9UPR0 1127 aa23.07■■□□□ 1.28
TNFRSF4-203ENST00000497869 EXO1Q9UQ84 846 aaKnown RBP23.07■■□□□ 1.28
TNFRSF4-203ENST00000497869 EIF3LQ9Y262 564 aaKnown RBP23.07■■□□□ 1.28
TNFRSF4-203ENST00000497869 TOX3O15405 576 aaPredicted RBP23.06■■□□□ 1.28
TNFRSF4-203ENST00000497869 TMPRSS11DO60235 418 aa23.06■■□□□ 1.28
TNFRSF4-203ENST00000497869 PCDH7O60245 1069 aa23.06■■□□□ 1.28
TNFRSF4-203ENST00000497869 CBX6O95503 412 aa23.06■■□□□ 1.28
TNFRSF4-203ENST00000497869 ANKRD34CP0C6C1 535 aa23.06■■□□□ 1.28
TNFRSF4-203ENST00000497869 PDCD4Q53EL6 469 aaKnown RBP23.06■■□□□ 1.28
TNFRSF4-203ENST00000497869 TMEM35AQ53FP2 167 aa23.06■■□□□ 1.28
TNFRSF4-203ENST00000497869 CAMKVQ8NCB2 501 aa23.06■■□□□ 1.28
TNFRSF4-203ENST00000497869 RGMAQ96B86 450 aa23.06■■□□□ 1.28
TNFRSF4-203ENST00000497869 TMEM74Q96NL1 305 aa23.06■■□□□ 1.28
TNFRSF4-203ENST00000497869 NMRK1Q9NWW6 199 aa23.06■■□□□ 1.28
TNFRSF4-203ENST00000497869 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 PSMD12O00232 456 aaPredicted RBP23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 EBAG9O00559 213 aa23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 HYAL3O43820 417 aaPredicted RBP23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 SLC35G6P0C7Q6 338 aa23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 ACPPP15309 386 aa23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 ZFP36L1Q07352 338 aaKnown RBP23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 OR4C11Q6IEV9 310 aa23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 GK5Q6ZS86 529 aa23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 MIER2Q8N344 545 aa23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 POU5F2Q8N7G0 328 aa23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 OR8K5Q8NH50 307 aa23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 QRFPRQ96P65 431 aa23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 DDX31Q9H8H2 851 aaKnown RBP23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 SLC52A3Q9NQ40 469 aa23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 CCDC167Q9P0B6 97 aa23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 COL27A1Q8IZC6 1860 aaPredicted RBP23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 RIF1Q5UIP0 2472 aaKnown RBP23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 SRPX2O60687 465 aaPredicted RBP23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 ANXA4P09525 319 aaPredicted RBP23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 RAP1GDS1P52306 607 aa23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 RGS1Q08116 209 aa23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 MAD2L1Q13257 205 aaPredicted RBP23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 ZSCAN26Q16670 478 aa23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 CCDC157Q569K6 752 aa23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 PRAMEF17Q5VTA0 474 aa23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 KMT5CQ86Y97 462 aa23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 PDSS2Q86YH6 399 aa23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 MMP21Q8N119 569 aa23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 C10orf90Q96M02 699 aa23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 CAPN7Q9Y6W3 813 aa23.05■■□□□ 1.28
TNFRSF4-203ENST00000497869 A0A0A6YYD5 115 aa23.04■■□□□ 1.28
TNFRSF4-203ENST00000497869 SPIDRQ14159 915 aa23.04■■□□□ 1.28
TNFRSF4-203ENST00000497869 AGKQ53H12 422 aa23.04■■□□□ 1.28
TNFRSF4-203ENST00000497869 OR1L3Q8NH93 324 aa23.04■■□□□ 1.28
TNFRSF4-203ENST00000497869 MCM8Q9UJA3 840 aa23.04■■□□□ 1.28
TNFRSF4-203ENST00000497869 WDFY3Q8IZQ1 3526 aa23.04■■□□□ 1.28
TNFRSF4-203ENST00000497869 LOC100653049A0A140TA62 436 aa23.03■■□□□ 1.28
TNFRSF4-203ENST00000497869 KRT34O76011 436 aa23.03■■□□□ 1.28
TNFRSF4-203ENST00000497869 LRATO95237 230 aa23.03■■□□□ 1.28
TNFRSF4-203ENST00000497869 PRPS2P11908 318 aa23.03■■□□□ 1.28
TNFRSF4-203ENST00000497869 ATP5A1P25705 553 aaKnown RBP23.03■■□□□ 1.28
TNFRSF4-203ENST00000497869 STXBP1P61764 594 aaKnown RBP23.03■■□□□ 1.28
TNFRSF4-203ENST00000497869 BTN3A2P78410 334 aa23.03■■□□□ 1.28
TNFRSF4-203ENST00000497869 C16orf72Q14CZ0 275 aa23.03■■□□□ 1.28
TNFRSF4-203ENST00000497869 CLPPQ16740 277 aaPredicted RBP23.03■■□□□ 1.28
TNFRSF4-203ENST00000497869 RIMKLAQ8IXN7 391 aa23.03■■□□□ 1.28
TNFRSF4-203ENST00000497869 C16orf78Q8WTQ4 265 aa23.03■■□□□ 1.28
TNFRSF4-203ENST00000497869 UCN3Q969E3 161 aa23.03■■□□□ 1.28
TNFRSF4-203ENST00000497869 GFM2Q969S9 779 aaKnown RBP23.03■■□□□ 1.28
TNFRSF4-203ENST00000497869 GAL3ST3Q96A11 431 aa23.03■■□□□ 1.28
TNFRSF4-203ENST00000497869 CDC6Q99741 560 aa23.03■■□□□ 1.28
TNFRSF4-203ENST00000497869 DPYSL5Q9BPU6 564 aa23.03■■□□□ 1.28
TNFRSF4-203ENST00000497869 SIDT1Q9NXL6 827 aaKnown RBP23.03■■□□□ 1.28
TNFRSF4-203ENST00000497869 ERICH4A6NGS2 130 aa23.02■■□□□ 1.28
TNFRSF4-203ENST00000497869 TMEM150CB9EJG8 249 aa23.02■■□□□ 1.28
TNFRSF4-203ENST00000497869 HIST1H1TP22492 207 aaPredicted RBP23.02■■□□□ 1.28
TNFRSF4-203ENST00000497869 CERS1P27544 350 aa23.02■■□□□ 1.28
TNFRSF4-203ENST00000497869 SSR2P43308 183 aa23.02■■□□□ 1.28
TNFRSF4-203ENST00000497869 ARL4DP49703 201 aa23.02■■□□□ 1.28
TNFRSF4-203ENST00000497869 KRT72Q14CN4 511 aa23.02■■□□□ 1.28
TNFRSF4-203ENST00000497869 RPS6KA2Q15349 733 aa23.02■■□□□ 1.28
TNFRSF4-203ENST00000497869 DEFB134Q4QY38 66 aa23.02■■□□□ 1.28
TNFRSF4-203ENST00000497869 ACOT4Q8N9L9 421 aa23.02■■□□□ 1.28
TNFRSF4-203ENST00000497869 DEFB124Q8NES8 71 aa23.02■■□□□ 1.28
TNFRSF4-203ENST00000497869 ZNF501Q96CX3 271 aaPredicted RBP23.02■■□□□ 1.28
TNFRSF4-203ENST00000497869 KCNC2Q96PR1 638 aa23.02■■□□□ 1.28
TNFRSF4-203ENST00000497869 ENAMQ9NRM1 1142 aa23.02■■□□□ 1.28
TNFRSF4-203ENST00000497869 AHSPQ9NZD4 102 aa23.02■■□□□ 1.28
TNFRSF4-203ENST00000497869 ZIM2Q9NZV7 527 aa23.02■■□□□ 1.28
TNFRSF4-203ENST00000497869 ADAMTS20P59510 1910 aa23.02■■□□□ 1.28
TNFRSF4-203ENST00000497869 GNG14A0A1W2PPG7 69 aa23.02■■□□□ 1.28
TNFRSF4-203ENST00000497869 ZSCAN9O15535 394 aaPredicted RBP23.02■■□□□ 1.28
TNFRSF4-203ENST00000497869 SLC22A3O75751 556 aa23.02■■□□□ 1.28
TNFRSF4-203ENST00000497869 MSL3P1P0C860 447 aa23.02■■□□□ 1.28
TNFRSF4-203ENST00000497869 IL1RNP18510 177 aa23.02■■□□□ 1.28
TNFRSF4-203ENST00000497869 JAK1P23458 1154 aa23.02■■□□□ 1.28
TNFRSF4-203ENST00000497869 CLDN8P56748 225 aa23.02■■□□□ 1.28
TNFRSF4-203ENST00000497869 STX1BP61266 288 aa23.02■■□□□ 1.28
TNFRSF4-203ENST00000497869 INSM1Q01101 510 aaPredicted RBP23.02■■□□□ 1.28
TNFRSF4-203ENST00000497869 MC1RQ01726 317 aa23.02■■□□□ 1.28
TNFRSF4-203ENST00000497869 BNIP1Q12981 228 aa23.02■■□□□ 1.28
TNFRSF4-203ENST00000497869 PRSS53Q2L4Q9 553 aa23.02■■□□□ 1.28
TNFRSF4-203ENST00000497869 MANEAQ5SRI9 462 aa23.02■■□□□ 1.28
TNFRSF4-203ENST00000497869 CCNYL2Q5T2Q4 361 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms