RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 OR9Q1Q8NGQ5 310 aa8.74□□□□□ -1.01
HPS4-217ENST00000496385 CLHC1Q8NHS4 586 aa8.74□□□□□ -1.01
HPS4-217ENST00000496385 UCN3Q969E3 161 aa8.74□□□□□ -1.01
HPS4-217ENST00000496385 UBE2FQ969M7 185 aa8.74□□□□□ -1.01
HPS4-217ENST00000496385 ULK4Q96C45 1275 aa8.74□□□□□ -1.01
HPS4-217ENST00000496385 FAM120BQ96EK7 910 aaKnown RBP8.74□□□□□ -1.01
HPS4-217ENST00000496385 TOX2Q96NM4 488 aa8.74□□□□□ -1.01
HPS4-217ENST00000496385 FAM129BQ96TA1 746 aa8.74□□□□□ -1.01
HPS4-217ENST00000496385 BARD1Q99728 777 aaKnown RBP8.74□□□□□ -1.01
HPS4-217ENST00000496385 NPAS1Q99742 590 aa8.74□□□□□ -1.01
HPS4-217ENST00000496385 DPCDQ9BVM2 203 aaPredicted RBP8.74□□□□□ -1.01
HPS4-217ENST00000496385 RSPH9Q9H1X1 276 aaPredicted RBP8.74□□□□□ -1.01
HPS4-217ENST00000496385 CD93Q9NPY3 652 aa8.74□□□□□ -1.01
HPS4-217ENST00000496385 SLC35C2Q9NQQ7 365 aa8.74□□□□□ -1.01
HPS4-217ENST00000496385 SDHAF2Q9NX18 166 aa8.74□□□□□ -1.01
HPS4-217ENST00000496385 MBD2Q9UBB5 411 aa8.74□□□□□ -1.01
HPS4-217ENST00000496385 NLKQ9UBE8 527 aa8.74□□□□□ -1.01
HPS4-217ENST00000496385 EVLQ9UI08 416 aaPredicted RBP8.74□□□□□ -1.01
HPS4-217ENST00000496385 TRBV5-3A0A0A0MS03 114 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 A0A0A6YYJ9 748 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 A0A1W2PQL4 384 aaPredicted RBP8.73□□□□□ -1.01
HPS4-217ENST00000496385 C7orf66A4D0T2 115 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 MBLAC1A4D2B0 266 aaPredicted RBP8.73□□□□□ -1.01
HPS4-217ENST00000496385 RRN3P2A6NIE6 340 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 MPTX1A8MV57 137 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 MYO1GB0I1T2 1018 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 E9PAM4 449 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 SMLR1H3BR10 107 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 PER2O15055 1255 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 ECDO95905 644 aaPredicted RBP8.73□□□□□ -1.01
HPS4-217ENST00000496385 DHFRP00374 187 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 STOMP27105 288 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 EPHA2P29317 976 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 SDC2P34741 201 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 EPHA5P54756 1037 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 SSTP61278 116 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 ZNF91Q05481 1191 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 RPA4Q13156 261 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 MED22Q15528 200 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 LTB4RQ15722 352 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 C1orf53Q5VUE5 145 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 RNLSQ5VYX0 342 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 FCRLBQ6BAA4 426 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 CILP2Q8IUL8 1156 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 OR56A4Q8NGH8 313 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 SLC9A6Q92581 669 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 NXPE2Q96DL1 559 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 ZBED6CLQ96FA7 236 aaPredicted RBP8.73□□□□□ -1.01
HPS4-217ENST00000496385 OSMRQ99650 979 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 PRR14Q9BWN1 585 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 ZNF436Q9C0F3 470 aaPredicted RBP8.73□□□□□ -1.01
HPS4-217ENST00000496385 PITHD1Q9GZP4 211 aaPredicted RBP8.73□□□□□ -1.01
HPS4-217ENST00000496385 ACTL8Q9H568 366 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 PPP1R3EQ9H7J1 279 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 SNTG1Q9NSN8 517 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 GPR83Q9NYM4 423 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 JCHAINP01591 159 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 DARSP14868 501 aaKnown RBP8.73□□□□□ -1.01
HPS4-217ENST00000496385 MAPK1P28482 360 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 PRKAR1BP31321 381 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 ADRA1AP35348 466 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 ERVFC1P60507 584 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 PUDPQ08623 228 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 MBTPS1Q14703 1052 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 FAM171A1Q5VUB5 890 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 Q6ZSR9 355 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 GPR155Q7Z3F1 870 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 UNC93AQ86WB7 457 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 PGBD5Q8N414 524 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 EIF4E3Q8N5X7 224 aaKnown RBP8.73□□□□□ -1.01
HPS4-217ENST00000496385 PLA2G15Q8NCC3 412 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 OR2T11Q8NH01 316 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 FOXJ1Q92949 421 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 ASIC4Q96FT7 647 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 LINC00052Q96N35 136 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 NSUN5Q96P11 429 aaKnown RBP8.73□□□□□ -1.01
HPS4-217ENST00000496385 TMEM43Q9BTV4 400 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 B3GNT5Q9BYG0 378 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 ARNT2Q9HBZ2 717 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 GALNT9Q9HCQ5 603 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 EXOSC4Q9NPD3 245 aaKnown RBP8.73□□□□□ -1.01
HPS4-217ENST00000496385 GLYATL1P3A0A0U1RQE8 302 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 KLK8O60259 260 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 PRAMEF1O95521 474 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 CYP17A1P05093 508 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 H2AFB1P0C5Y9 115 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 H2AFB2P0C5Z0 115 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 CRYBB2P43320 205 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 MAN2A2P49641 1150 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 RGS19P49795 217 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 TPI1P60174 286 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 TSNQ15631 228 aaKnown RBP8.73□□□□□ -1.01
HPS4-217ENST00000496385 LRIF1Q5T3J3 769 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 PLAG1Q6DJT9 500 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 KRT74Q7RTS7 529 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 MRPL10Q7Z7H8 261 aaKnown RBP8.73□□□□□ -1.01
HPS4-217ENST00000496385 ADGRF3Q8IZF5 1079 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 SLC34A3Q8N130 599 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 Q8N402 240 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 TMEM40Q8WWA1 233 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms