RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 EFCAB11Q9BUY7 163 aa14.8□□□□□ -0.04
HDAC4-213ENST00000496347 NT5DC2Q9H857 520 aa14.8□□□□□ -0.04
HDAC4-213ENST00000496347 MMP25Q9NPA2 562 aa14.8□□□□□ -0.04
HDAC4-213ENST00000496347 NUDT4Q9NZJ9 180 aa14.8□□□□□ -0.04
HDAC4-213ENST00000496347 CD274Q9NZQ7 290 aa14.8□□□□□ -0.04
HDAC4-213ENST00000496347 RNF112Q9ULX5 631 aa14.8□□□□□ -0.04
HDAC4-213ENST00000496347 IGHV3-20A0A0C4DH32 117 aa14.79□□□□□ -0.04
HDAC4-213ENST00000496347 CTAGE15A4D2H0 777 aa14.79□□□□□ -0.04
HDAC4-213ENST00000496347 PSMD12O00232 456 aaPredicted RBP14.79□□□□□ -0.04
HDAC4-213ENST00000496347 E2F3O00716 465 aa14.79□□□□□ -0.04
HDAC4-213ENST00000496347 CHST10O43529 356 aa14.79□□□□□ -0.04
HDAC4-213ENST00000496347 KERAO60938 352 aa14.79□□□□□ -0.04
HDAC4-213ENST00000496347 CLEC3AO75596 197 aa14.79□□□□□ -0.04
HDAC4-213ENST00000496347 RNH1P13489 461 aaKnown RBP14.79□□□□□ -0.04
HDAC4-213ENST00000496347 OLR1P78380 273 aa14.79□□□□□ -0.04
HDAC4-213ENST00000496347 ZNF33BQ06732 778 aa14.79□□□□□ -0.04
HDAC4-213ENST00000496347 EFTUD2Q15029 972 aaKnown RBP eCLIP14.79□□□□□ -0.04
HDAC4-213ENST00000496347 C18orf21Q32NC0 220 aaPredicted RBP14.79□□□□□ -0.04
HDAC4-213ENST00000496347 SFT2D3Q587I9 215 aa14.79□□□□□ -0.04
HDAC4-213ENST00000496347 PAGE2BQ5JRK9 111 aa14.79□□□□□ -0.04
HDAC4-213ENST00000496347 TOR1AIP1Q5JTV8 583 aa14.79□□□□□ -0.04
HDAC4-213ENST00000496347 CMC1Q7Z7K0 106 aa14.79□□□□□ -0.04
HDAC4-213ENST00000496347 CTAGE6Q86UF2 777 aa14.79□□□□□ -0.04
HDAC4-213ENST00000496347 RELL1Q8IUW5 271 aa14.79□□□□□ -0.04
HDAC4-213ENST00000496347 SHISA5Q8N114 240 aa14.79□□□□□ -0.04
HDAC4-213ENST00000496347 LGI4Q8N135 537 aa14.79□□□□□ -0.04
HDAC4-213ENST00000496347 BCORP1Q8N888 145 aa14.79□□□□□ -0.04
HDAC4-213ENST00000496347 STAG3L4Q8TBR4 150 aa14.79□□□□□ -0.04
HDAC4-213ENST00000496347 M1APQ8TC57 530 aa14.79□□□□□ -0.04
HDAC4-213ENST00000496347 ADAMTS18Q8TE60 1221 aa14.79□□□□□ -0.04
HDAC4-213ENST00000496347 GRHL3Q8TE85 626 aa14.79□□□□□ -0.04
HDAC4-213ENST00000496347 SSC4DQ8WTU2 575 aa14.79□□□□□ -0.04
HDAC4-213ENST00000496347 UBTD2Q8WUN7 234 aa14.79□□□□□ -0.04
HDAC4-213ENST00000496347 TSLPQ969D9 159 aa14.79□□□□□ -0.04
HDAC4-213ENST00000496347 PTCD3Q96EY7 689 aaKnown RBP14.79□□□□□ -0.04
HDAC4-213ENST00000496347 PSMG3-AS1Q96PY0 264 aa14.79□□□□□ -0.04
HDAC4-213ENST00000496347 SLX1AQ9BQ83 275 aa14.79□□□□□ -0.04
HDAC4-213ENST00000496347 TSPYL1Q9H0U9 437 aa14.79□□□□□ -0.04
HDAC4-213ENST00000496347 NMRAL1Q9HBL8 299 aa14.79□□□□□ -0.04
HDAC4-213ENST00000496347 ABI3Q9P2A4 366 aa14.79□□□□□ -0.04
HDAC4-213ENST00000496347 MTRF1LQ9UGC7 380 aaKnown RBP14.79□□□□□ -0.04
HDAC4-213ENST00000496347 PTBP2Q9UKA9 531 aaKnown RBP14.79□□□□□ -0.04
HDAC4-213ENST00000496347 IGKV3D-11A0A0A0MRZ8 115 aa14.78□□□□□ -0.04
HDAC4-213ENST00000496347 OR5H15A6NDH6 313 aa14.78□□□□□ -0.04
HDAC4-213ENST00000496347 C4orf51C9J302 202 aa14.78□□□□□ -0.04
HDAC4-213ENST00000496347 CLGNO14967 610 aa14.78□□□□□ -0.04
HDAC4-213ENST00000496347 TAPBPO15533 448 aa14.78□□□□□ -0.04
HDAC4-213ENST00000496347 FAM155BO75949 473 aa14.78□□□□□ -0.04
HDAC4-213ENST00000496347 URI1O94763 535 aaPredicted RBP14.78□□□□□ -0.04
HDAC4-213ENST00000496347 WDPCPO95876 746 aa14.78□□□□□ -0.04
HDAC4-213ENST00000496347 LTA4HP09960 611 aaKnown RBP14.78□□□□□ -0.04
HDAC4-213ENST00000496347 SMIM10L1P0DMW3 83 aa14.78□□□□□ -0.04
HDAC4-213ENST00000496347 MYBL2P10244 700 aa14.78□□□□□ -0.04
HDAC4-213ENST00000496347 GP1BBP13224 206 aa14.78□□□□□ -0.04
HDAC4-213ENST00000496347 EDN3P14138 238 aa14.78□□□□□ -0.04
HDAC4-213ENST00000496347 PHBP35232 272 aa14.78□□□□□ -0.04
HDAC4-213ENST00000496347 HSPA7P48741 367 aa14.78□□□□□ -0.04
HDAC4-213ENST00000496347 TAS2R50P59544 299 aa14.78□□□□□ -0.04
HDAC4-213ENST00000496347 RAB8AP61006 207 aa14.78□□□□□ -0.04
HDAC4-213ENST00000496347 SLC7A5Q01650 507 aa14.78□□□□□ -0.04
HDAC4-213ENST00000496347 TBCCQ15814 346 aa14.78□□□□□ -0.04
HDAC4-213ENST00000496347 H3F3CQ6NXT2 135 aa14.78□□□□□ -0.04
HDAC4-213ENST00000496347 SLC5A8Q8N695 610 aa14.78□□□□□ -0.04
HDAC4-213ENST00000496347 SNX31Q8N9S9 440 aa14.78□□□□□ -0.04
HDAC4-213ENST00000496347 MNS1Q8NEH6 495 aa14.78□□□□□ -0.04
HDAC4-213ENST00000496347 FAR1Q8WVX9 515 aa14.78□□□□□ -0.04
HDAC4-213ENST00000496347 EXT2Q93063 718 aa14.78□□□□□ -0.04
HDAC4-213ENST00000496347 SMIM10Q96HG1 83 aa14.78□□□□□ -0.04
HDAC4-213ENST00000496347 LRRC1Q9BTT6 524 aa14.78□□□□□ -0.04
HDAC4-213ENST00000496347 ALG9Q9H6U8 611 aa14.78□□□□□ -0.04
HDAC4-213ENST00000496347 MMACHCQ9Y4U1 282 aa14.78□□□□□ -0.04
HDAC4-213ENST00000496347 A0A087X1B8 175 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 BLACEA4D250 179 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 LRIT2A6NDA9 550 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 SYNDIG1LA6NDD5 238 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 OR2W5A6NFC9 320 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 SYCE1LA8MT33 242 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 CDK2AP1O14519 115 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 ERI3O43414 337 aaKnown RBP14.77□□□□□ -0.05
HDAC4-213ENST00000496347 PRMT3O60678 531 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 SEMA7AO75326 666 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 DDAH2O95865 285 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 B3GALT4O96024 378 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 TUBB4AP04350 444 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 TFEBP19484 476 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 HNRNPH1P31943 449 aaKnown RBP14.77□□□□□ -0.05
HDAC4-213ENST00000496347 HNF4AP41235 474 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 OR4D2P58180 307 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 LAPTM5Q13571 262 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 E2F2Q14209 437 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 ADPRMQ3LIE5 342 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 XKR6Q5GH73 641 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 ISCA2Q86U28 154 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 CATSPER1Q8NEC5 780 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 ARMC2Q8NEN0 867 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 OR1N1Q8NGS0 311 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 SUN3Q8TAQ9 357 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 PRR7Q8TB68 274 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 MS4A6EQ96DS6 147 aa14.77□□□□□ -0.05
HDAC4-213ENST00000496347 FAR2Q96K12 515 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms