RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 BTBD1Q9H0C5 482 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 CXorf56Q9H5V9 222 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 ZNF576Q9H609 170 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 RPF2Q9H7B2 306 aaKnown RBP6.64□□□□□ -1.35
USP39-219ENST00000496047 ZNF696Q9H7X3 374 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 KAT8Q9H7Z6 458 aaKnown RBP6.64□□□□□ -1.35
USP39-219ENST00000496047 NEUROD4Q9HD90 331 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 VCX3AQ9NNX9 186 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 MRPS30Q9NP92 439 aaKnown RBP6.64□□□□□ -1.35
USP39-219ENST00000496047 ZSCAN32Q9NX65 697 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 SLAMF8Q9P0V8 285 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 CLEC1BQ9P126 229 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 DNAJB9Q9UBS3 223 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 CIDEBQ9UHD4 219 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 ADAM29Q9UKF5 820 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 ANGPT4Q9Y264 503 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 SLC17A4Q9Y2C5 497 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 MYRFQ9Y2G1 1151 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 OR1A2Q9Y585 309 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 V9GYQ6 96 aa6.64□□□□□ -1.35
USP39-219ENST00000496047 TRBV5-3A0A0A0MS03 114 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 SMIM31A0A1B0GVY4 71 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 TRBC2A0A5B9 178 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 PRSS38A1L453 326 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 URADA6NGE7 173 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 MAN2B1O00754 1011 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 PDPK1O15530 556 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 NDUFS4O43181 175 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 CLEC3AO75596 197 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 PDE9AO76083 593 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 FKBP9O95302 570 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 APBB3O95704 486 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 ZNF682O95780 498 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 CLPTM1O96005 669 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 SERPINA1P01009 418 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 EGFP01133 1207 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 FABP3P05413 133 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 PIM1P11309 404 aaPredicted RBP6.63□□□□□ -1.35
USP39-219ENST00000496047 ZNF26P17031 533 aaPredicted RBP6.63□□□□□ -1.35
USP39-219ENST00000496047 GPX2P18283 190 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 ZNF10P21506 573 aaPredicted RBP6.63□□□□□ -1.35
USP39-219ENST00000496047 TACR1P25103 407 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 OXTRP30559 389 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 PKLRP30613 574 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 NTSP30990 170 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 PCGF2P35227 344 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 CAPGP40121 348 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 RPS9P46781 194 aaKnown RBP6.63□□□□□ -1.35
USP39-219ENST00000496047 ALDH3A2P51648 485 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 RPS6KA3P51812 740 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 STXBP1P61764 594 aaKnown RBP6.63□□□□□ -1.35
USP39-219ENST00000496047 ESRRGP62508 458 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 PRKCQQ04759 706 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 MERTKQ12866 999 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 DAG1Q14118 895 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 SELPLGQ14242 412 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 LRRC32Q14392 662 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 NFATC4Q14934 902 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 VMACQ2NL98 169 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 UAP1L1Q3KQV9 507 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.63□□□□□ -1.35
USP39-219ENST00000496047 TMEM35AQ53FP2 167 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 SLC44A4Q53GD3 710 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 PYCR3Q53H96 274 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 C6orf52Q5T4I8 152 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 GCNT6Q5T4J0 391 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 KHDRBS2Q5VWX1 349 aaKnown RBP6.63□□□□□ -1.35
USP39-219ENST00000496047 TTC23Q5W5X9 447 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 NAIF1Q69YI7 327 aaPredicted RBP6.63□□□□□ -1.35
USP39-219ENST00000496047 HMBOX1Q6NT76 420 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 ZCCHC8Q6NZY4 707 aaKnown RBP6.63□□□□□ -1.35
USP39-219ENST00000496047 TTC33Q6PID6 262 aaPredicted RBP6.63□□□□□ -1.35
USP39-219ENST00000496047 ABRAXAS1Q6UWZ7 409 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 THADAQ6YHU6 1953 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 FAM83HQ6ZRV2 1179 aaPredicted RBP6.63□□□□□ -1.35
USP39-219ENST00000496047 TMEM26Q6ZUK4 368 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 SPRED1Q7Z699 444 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 CALHM3Q86XJ0 350 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 SFTPA1Q8IWL2 248 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 LRRC56Q8IYG6 542 aaPredicted RBP6.63□□□□□ -1.35
USP39-219ENST00000496047 PGBD3Q8N328 593 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 CBR4Q8N4T8 237 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 ZNF655Q8N720 491 aaPredicted RBP6.63□□□□□ -1.35
USP39-219ENST00000496047 IL17RCQ8NAC3 791 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 ST13P5Q8NFI4 369 aaPredicted RBP6.63□□□□□ -1.35
USP39-219ENST00000496047 OR7A2PQ8NGA2 310 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 OR5K1Q8NHB7 308 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 C16orf78Q8WTQ4 265 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 CYGBQ8WWM9 190 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 KLK6Q92876 244 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 FAM131CQ96AQ9 280 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 COQ8BQ96D53 544 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 PYURFQ96I23 114 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 CAMK1GQ96NX5 476 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 IL17FQ96PD4 163 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 GAS2L1Q99501 681 aaPredicted RBP6.63□□□□□ -1.35
USP39-219ENST00000496047 ADI1Q9BV57 179 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 ACAT2Q9BWD1 397 aa6.63□□□□□ -1.35
USP39-219ENST00000496047 YTHDF1Q9BYJ9 559 aaKnown RBP6.63□□□□□ -1.35
USP39-219ENST00000496047 NLNQ9BYT8 704 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms