RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 WHAMMP3Q1A5X7 153 aa22.79■■□□□ 1.24
HLA-C-209ENST00000495835 SFT2D3Q587I9 215 aa22.79■■□□□ 1.24
HLA-C-209ENST00000495835 PAPD4Q6PIY7 484 aaKnown RBP22.79■■□□□ 1.24
HLA-C-209ENST00000495835 SHISA5Q8N114 240 aa22.79■■□□□ 1.24
HLA-C-209ENST00000495835 SPATA6LQ8N4H0 392 aa22.79■■□□□ 1.24
HLA-C-209ENST00000495835 BCORP1Q8N888 145 aa22.79■■□□□ 1.24
HLA-C-209ENST00000495835 SUN3Q8TAQ9 357 aa22.79■■□□□ 1.24
HLA-C-209ENST00000495835 TMEM79Q9BSE2 394 aa22.79■■□□□ 1.24
HLA-C-209ENST00000495835 PLA2G3Q9NZ20 509 aa22.79■■□□□ 1.24
HLA-C-209ENST00000495835 CD274Q9NZQ7 290 aa22.79■■□□□ 1.24
HLA-C-209ENST00000495835 RNF112Q9ULX5 631 aa22.79■■□□□ 1.24
HLA-C-209ENST00000495835 PCDHGB6Q9Y5F9 930 aa22.79■■□□□ 1.24
HLA-C-209ENST00000495835 POLEQ07864 2286 aa22.78■■□□□ 1.24
HLA-C-209ENST00000495835 A0A088AWK7 358 aa22.78■■□□□ 1.24
HLA-C-209ENST00000495835 OR5H15A6NDH6 313 aa22.78■■□□□ 1.24
HLA-C-209ENST00000495835 OR2W5A6NFC9 320 aa22.78■■□□□ 1.24
HLA-C-209ENST00000495835 ANKDD1BA6NHY2 528 aa22.78■■□□□ 1.24
HLA-C-209ENST00000495835 PSMD12O00232 456 aaPredicted RBP22.78■■□□□ 1.24
HLA-C-209ENST00000495835 PRMT3O60678 531 aa22.78■■□□□ 1.24
HLA-C-209ENST00000495835 SEMA7AO75326 666 aa22.78■■□□□ 1.24
HLA-C-209ENST00000495835 S100BP04271 92 aaPredicted RBP22.78■■□□□ 1.24
HLA-C-209ENST00000495835 ZNF10P21506 573 aaPredicted RBP22.78■■□□□ 1.24
HLA-C-209ENST00000495835 OR4D2P58180 307 aa22.78■■□□□ 1.24
HLA-C-209ENST00000495835 RAB8AP61006 207 aa22.78■■□□□ 1.24
HLA-C-209ENST00000495835 SLBPQ14493 270 aaKnown RBP eCLIP22.78■■□□□ 1.24
HLA-C-209ENST00000495835 OR4D1Q15615 310 aa22.78■■□□□ 1.24
HLA-C-209ENST00000495835 C18orf21Q32NC0 220 aaPredicted RBP22.78■■□□□ 1.24
HLA-C-209ENST00000495835 RAPH1Q70E73 1250 aa22.78■■□□□ 1.24
HLA-C-209ENST00000495835 TBC1D1Q86TI0 1168 aaPredicted RBP22.78■■□□□ 1.24
HLA-C-209ENST00000495835 LGI4Q8N135 537 aa22.78■■□□□ 1.24
HLA-C-209ENST00000495835 PTCD3Q96EY7 689 aaKnown RBP22.78■■□□□ 1.24
HLA-C-209ENST00000495835 FAR2Q96K12 515 aa22.78■■□□□ 1.24
HLA-C-209ENST00000495835 LRRC1Q9BTT6 524 aa22.78■■□□□ 1.24
HLA-C-209ENST00000495835 EFCAB11Q9BUY7 163 aa22.78■■□□□ 1.24
HLA-C-209ENST00000495835 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.78■■□□□ 1.24
HLA-C-209ENST00000495835 TSPYL1Q9H0U9 437 aa22.78■■□□□ 1.24
HLA-C-209ENST00000495835 KLHL31Q9H511 634 aa22.78■■□□□ 1.24
HLA-C-209ENST00000495835 KCNK13Q9HB14 408 aa22.78■■□□□ 1.24
HLA-C-209ENST00000495835 ZDHHC18Q9NUE0 388 aa22.78■■□□□ 1.24
HLA-C-209ENST00000495835 SPTAN1Q13813 2472 aaKnown RBP22.77■■□□□ 1.24
HLA-C-209ENST00000495835 UTP20O75691 2785 aaKnown RBP22.77■■□□□ 1.24
HLA-C-209ENST00000495835 LRIT2A6NDA9 550 aa22.77■■□□□ 1.24
HLA-C-209ENST00000495835 SYNDIG1LA6NDD5 238 aa22.77■■□□□ 1.24
HLA-C-209ENST00000495835 WIPF3A6NGB9 483 aa22.77■■□□□ 1.24
HLA-C-209ENST00000495835 CDC123O75794 336 aaPredicted RBP22.77■■□□□ 1.24
HLA-C-209ENST00000495835 TUBB4AP04350 444 aa22.77■■□□□ 1.24
HLA-C-209ENST00000495835 SLC35E2BP0CK96 405 aa22.77■■□□□ 1.24
HLA-C-209ENST00000495835 ZNF33BQ06732 778 aa22.77■■□□□ 1.24
HLA-C-209ENST00000495835 E2F2Q14209 437 aa22.77■■□□□ 1.24
HLA-C-209ENST00000495835 TBCCQ15814 346 aa22.77■■□□□ 1.24
HLA-C-209ENST00000495835 PDK4Q16654 411 aa22.77■■□□□ 1.24
HLA-C-209ENST00000495835 MEP1AQ16819 746 aa22.77■■□□□ 1.24
HLA-C-209ENST00000495835 ADPRMQ3LIE5 342 aa22.77■■□□□ 1.24
HLA-C-209ENST00000495835 TOR1AIP1Q5JTV8 583 aa22.77■■□□□ 1.24
HLA-C-209ENST00000495835 ACER2Q5QJU3 275 aa22.77■■□□□ 1.24
HLA-C-209ENST00000495835 ISCA2Q86U28 154 aa22.77■■□□□ 1.24
HLA-C-209ENST00000495835 RELL1Q8IUW5 271 aa22.77■■□□□ 1.24
HLA-C-209ENST00000495835 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP22.77■■□□□ 1.24
HLA-C-209ENST00000495835 DNAJB8Q8NHS0 232 aa22.77■■□□□ 1.24
HLA-C-209ENST00000495835 PTCHD1Q96NR3 888 aa22.77■■□□□ 1.24
HLA-C-209ENST00000495835 SLX1AQ9BQ83 275 aa22.77■■□□□ 1.24
HLA-C-209ENST00000495835 CD244Q9BZW8 370 aa22.77■■□□□ 1.24
HLA-C-209ENST00000495835 UNKQ9C0B0 810 aaKnown RBP22.77■■□□□ 1.24
HLA-C-209ENST00000495835 PRDM9Q9NQV7 894 aa22.77■■□□□ 1.24
HLA-C-209ENST00000495835 ABI3Q9P2A4 366 aa22.77■■□□□ 1.24
HLA-C-209ENST00000495835 SLC5A6Q9Y289 635 aa22.77■■□□□ 1.24
HLA-C-209ENST00000495835 SPTBN1Q01082 2364 aaKnown RBP22.77■■□□□ 1.24
HLA-C-209ENST00000495835 CTAGE15A4D2H0 777 aa22.76■■□□□ 1.23
HLA-C-209ENST00000495835 A8MUI8 341 aa22.76■■□□□ 1.23
HLA-C-209ENST00000495835 DNAJB6O75190 326 aa22.76■■□□□ 1.23
HLA-C-209ENST00000495835 URI1O94763 535 aaPredicted RBP22.76■■□□□ 1.23
HLA-C-209ENST00000495835 LTA4HP09960 611 aaKnown RBP22.76■■□□□ 1.23
HLA-C-209ENST00000495835 PHBP35232 272 aa22.76■■□□□ 1.23
HLA-C-209ENST00000495835 HNF4AP41235 474 aa22.76■■□□□ 1.23
HLA-C-209ENST00000495835 CASP2P42575 452 aa22.76■■□□□ 1.23
HLA-C-209ENST00000495835 HSPA7P48741 367 aa22.76■■□□□ 1.23
HLA-C-209ENST00000495835 OLR1P78380 273 aa22.76■■□□□ 1.23
HLA-C-209ENST00000495835 SLC7A5Q01650 507 aa22.76■■□□□ 1.23
HLA-C-209ENST00000495835 PCDH1Q08174 1060 aa22.76■■□□□ 1.23
HLA-C-209ENST00000495835 PAGE2BQ5JRK9 111 aa22.76■■□□□ 1.23
HLA-C-209ENST00000495835 ZNF324BQ6AW86 544 aaPredicted RBP22.76■■□□□ 1.23
HLA-C-209ENST00000495835 LRRC70Q7Z2Q7 622 aa22.76■■□□□ 1.23
HLA-C-209ENST00000495835 CTAGE6Q86UF2 777 aa22.76■■□□□ 1.23
HLA-C-209ENST00000495835 ARMC2Q8NEN0 867 aa22.76■■□□□ 1.23
HLA-C-209ENST00000495835 ADAMTS18Q8TE60 1221 aa22.76■■□□□ 1.23
HLA-C-209ENST00000495835 MS4A6EQ96DS6 147 aa22.76■■□□□ 1.23
HLA-C-209ENST00000495835 RBCK1Q9BYM8 510 aa22.76■■□□□ 1.23
HLA-C-209ENST00000495835 RHBGQ9H310 441 aa22.76■■□□□ 1.23
HLA-C-209ENST00000495835 NUDT4Q9NZJ9 180 aa22.76■■□□□ 1.23
HLA-C-209ENST00000495835 ACOT9Q9Y305 439 aa22.76■■□□□ 1.23
HLA-C-209ENST00000495835 MMACHCQ9Y4U1 282 aa22.76■■□□□ 1.23
HLA-C-209ENST00000495835 B4GALT2O60909 372 aa22.75■■□□□ 1.23
HLA-C-209ENST00000495835 KERAO60938 352 aa22.75■■□□□ 1.23
HLA-C-209ENST00000495835 FAM155BO75949 473 aa22.75■■□□□ 1.23
HLA-C-209ENST00000495835 B3GALT4O96024 378 aa22.75■■□□□ 1.23
HLA-C-209ENST00000495835 SLC26A5P58743 744 aa22.75■■□□□ 1.23
HLA-C-209ENST00000495835 TAS2R50P59544 299 aa22.75■■□□□ 1.23
HLA-C-209ENST00000495835 SLMAPQ14BN4 828 aa22.75■■□□□ 1.23
HLA-C-209ENST00000495835 HIST2H2ACQ16777 129 aaPredicted RBP22.75■■□□□ 1.23
HLA-C-209ENST00000495835 XKR6Q5GH73 641 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms