RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 TRBC2A0A5B9 178 aa16.39■□□□□ 0.21
TMEM53-209ENST00000495630 CEP104O60308 925 aa16.39■□□□□ 0.21
TMEM53-209ENST00000495630 HAUS5O94927 633 aa16.39■□□□□ 0.21
TMEM53-209ENST00000495630 NADKO95544 446 aaPredicted RBP16.39■□□□□ 0.21
TMEM53-209ENST00000495630 HIST1H2AGP0C0S8 130 aaPredicted RBP16.39■□□□□ 0.21
TMEM53-209ENST00000495630 MLNP12872 115 aa16.39■□□□□ 0.21
TMEM53-209ENST00000495630 HIST1H2ADP20671 130 aa16.39■□□□□ 0.21
TMEM53-209ENST00000495630 DNAJA1P31689 397 aaKnown RBP16.39■□□□□ 0.21
TMEM53-209ENST00000495630 RFC3P40938 356 aa16.39■□□□□ 0.21
TMEM53-209ENST00000495630 SLC1A2P43004 574 aa16.39■□□□□ 0.21
TMEM53-209ENST00000495630 RGS4P49798 205 aa16.39■□□□□ 0.21
TMEM53-209ENST00000495630 CLCN2P51788 898 aa16.39■□□□□ 0.21
TMEM53-209ENST00000495630 OLR1P78380 273 aa16.39■□□□□ 0.21
TMEM53-209ENST00000495630 RGS1Q08116 209 aa16.39■□□□□ 0.21
TMEM53-209ENST00000495630 PMPCAQ10713 525 aa16.39■□□□□ 0.21
TMEM53-209ENST00000495630 SP140Q13342 867 aa16.39■□□□□ 0.21
TMEM53-209ENST00000495630 PAOXQ6QHF9 649 aa16.39■□□□□ 0.21
TMEM53-209ENST00000495630 ABHD13Q7L211 337 aa16.39■□□□□ 0.21
TMEM53-209ENST00000495630 TMEM156Q8N614 296 aa16.39■□□□□ 0.21
TMEM53-209ENST00000495630 NT5CQ8TCD5 201 aa16.39■□□□□ 0.21
TMEM53-209ENST00000495630 SNF8Q96H20 258 aa16.39■□□□□ 0.21
TMEM53-209ENST00000495630 HIST1H2AHQ96KK5 128 aa16.39■□□□□ 0.21
TMEM53-209ENST00000495630 HIST1H2AJQ99878 128 aa16.39■□□□□ 0.21
TMEM53-209ENST00000495630 H2AFJQ9BTM1 129 aa16.39■□□□□ 0.21
TMEM53-209ENST00000495630 TRMT6Q9UJA5 497 aaKnown RBP16.39■□□□□ 0.21
TMEM53-209ENST00000495630 ZFP69BQ9UJL9 534 aa16.39■□□□□ 0.21
TMEM53-209ENST00000495630 FBXO5Q9UKT4 447 aa16.39■□□□□ 0.21
TMEM53-209ENST00000495630 FAM90A27PA6NNH2 459 aa16.38■□□□□ 0.21
TMEM53-209ENST00000495630 PDE9AO76083 593 aa16.38■□□□□ 0.21
TMEM53-209ENST00000495630 F7P08709 466 aaPredicted RBP16.38■□□□□ 0.21
TMEM53-209ENST00000495630 ZNF888P0CJ79 500 aaPredicted RBP16.38■□□□□ 0.21
TMEM53-209ENST00000495630 EMC4Q5J8M3 183 aa16.38■□□□□ 0.21
TMEM53-209ENST00000495630 DUPD1Q68J44 220 aa16.38■□□□□ 0.21
TMEM53-209ENST00000495630 MBOAT1Q6ZNC8 495 aa16.38■□□□□ 0.21
TMEM53-209ENST00000495630 TMEM200AQ86VY9 491 aa16.38■□□□□ 0.21
TMEM53-209ENST00000495630 CLYBLQ8N0X4 340 aa16.38■□□□□ 0.21
TMEM53-209ENST00000495630 CYP4Z2PQ8N1L4 340 aa16.38■□□□□ 0.21
TMEM53-209ENST00000495630 APCDD1LQ8NCL9 501 aa16.38■□□□□ 0.21
TMEM53-209ENST00000495630 MCUQ8NE86 351 aa16.38■□□□□ 0.21
TMEM53-209ENST00000495630 OR52N2Q8NGI0 321 aa16.38■□□□□ 0.21
TMEM53-209ENST00000495630 UTP15Q8TED0 518 aaKnown RBP16.38■□□□□ 0.21
TMEM53-209ENST00000495630 C20orf96Q9NUD7 363 aaPredicted RBP16.38■□□□□ 0.21
TMEM53-209ENST00000495630 ZFATQ9P243 1243 aa16.38■□□□□ 0.21
TMEM53-209ENST00000495630 GUCA1BQ9UMX6 200 aa16.38■□□□□ 0.21
TMEM53-209ENST00000495630 INTS1Q8N201 2190 aaKnown RBP16.37■□□□□ 0.21
TMEM53-209ENST00000495630 URADA6NGE7 173 aa16.37■□□□□ 0.21
TMEM53-209ENST00000495630 A8MUA0 341 aa16.37■□□□□ 0.21
TMEM53-209ENST00000495630 PSMD12O00232 456 aaPredicted RBP16.37■□□□□ 0.21
TMEM53-209ENST00000495630 B3GALT4O96024 378 aa16.37■□□□□ 0.21
TMEM53-209ENST00000495630 FGGP02679 453 aa16.37■□□□□ 0.21
TMEM53-209ENST00000495630 SERPIND1P05546 499 aa16.37■□□□□ 0.21
TMEM53-209ENST00000495630 RNH1P13489 461 aaKnown RBP16.37■□□□□ 0.21
TMEM53-209ENST00000495630 MAOAP21397 527 aa16.37■□□□□ 0.21
TMEM53-209ENST00000495630 AHRP35869 848 aa16.37■□□□□ 0.21
TMEM53-209ENST00000495630 IST1P53990 364 aa16.37■□□□□ 0.21
TMEM53-209ENST00000495630 TERF1P54274 439 aa16.37■□□□□ 0.21
TMEM53-209ENST00000495630 GPS1Q13098 491 aa16.37■□□□□ 0.21
TMEM53-209ENST00000495630 TRIP13Q15645 432 aaPredicted RBP16.37■□□□□ 0.21
TMEM53-209ENST00000495630 GXYLT1Q4G148 440 aa16.37■□□□□ 0.21
TMEM53-209ENST00000495630 MDGA2Q7Z553 956 aa16.37■□□□□ 0.21
TMEM53-209ENST00000495630 CCDC71Q8IV32 467 aaPredicted RBP16.37■□□□□ 0.21
TMEM53-209ENST00000495630 MYO1HQ8N1T3 1032 aa16.37■□□□□ 0.21
TMEM53-209ENST00000495630 B3GNT7Q8NFL0 401 aa16.37■□□□□ 0.21
TMEM53-209ENST00000495630 OR56A3Q8NH54 315 aa16.37■□□□□ 0.21
TMEM53-209ENST00000495630 FOXC2Q99958 501 aa16.37■□□□□ 0.21
TMEM53-209ENST00000495630 DEFB127Q9H1M4 99 aa16.37■□□□□ 0.21
TMEM53-209ENST00000495630 CXXC4Q9H2H0 198 aa16.37■□□□□ 0.21
TMEM53-209ENST00000495630 XAB2Q9HCS7 855 aaKnown RBP16.37■□□□□ 0.21
TMEM53-209ENST00000495630 TIMMDC1Q9NPL8 285 aa16.37■□□□□ 0.21
TMEM53-209ENST00000495630 NECTIN3Q9NQS3 549 aa16.37■□□□□ 0.21
TMEM53-209ENST00000495630 TAS2R13Q9NYV9 303 aa16.37■□□□□ 0.21
TMEM53-209ENST00000495630 PPIEQ9UNP9 301 aaKnown RBP16.37■□□□□ 0.21
TMEM53-209ENST00000495630 YARS2Q9Y2Z4 477 aaKnown RBP16.37■□□□□ 0.21
TMEM53-209ENST00000495630 NAV3Q8IVL0 2385 aa16.37■□□□□ 0.21
TMEM53-209ENST00000495630 TRBV11-1A0A0K0K1C0 115 aa16.36■□□□□ 0.21
TMEM53-209ENST00000495630 KLK8O60259 260 aa16.36■□□□□ 0.21
TMEM53-209ENST00000495630 ITGA10O75578 1167 aa16.36■□□□□ 0.21
TMEM53-209ENST00000495630 SMIM10L1P0DMW3 83 aa16.36■□□□□ 0.21
TMEM53-209ENST00000495630 SCTRP47872 440 aa16.36■□□□□ 0.21
TMEM53-209ENST00000495630 NUP107P57740 925 aa16.36■□□□□ 0.21
TMEM53-209ENST00000495630 TIAL1Q01085 375 aaKnown RBP eCLIP16.36■□□□□ 0.21
TMEM53-209ENST00000495630 DHX9Q08211 1270 aaKnown RBP16.36■□□□□ 0.21
TMEM53-209ENST00000495630 CSHL1Q14406 222 aa16.36■□□□□ 0.21
TMEM53-209ENST00000495630 TERF2Q15554 542 aa16.36■□□□□ 0.21
TMEM53-209ENST00000495630 ANKRD22Q5VYY1 191 aa16.36■□□□□ 0.21
TMEM53-209ENST00000495630 RGS9BPQ6ZS82 235 aa16.36■□□□□ 0.21
TMEM53-209ENST00000495630 RPRMLQ8N4K4 120 aa16.36■□□□□ 0.21
TMEM53-209ENST00000495630 CHDHQ8NE62 594 aaPredicted RBP16.36■□□□□ 0.21
TMEM53-209ENST00000495630 TRPV3Q8NET8 790 aa16.36■□□□□ 0.21
TMEM53-209ENST00000495630 MYRIPQ8NFW9 859 aa16.36■□□□□ 0.21
TMEM53-209ENST00000495630 NINJ1Q92982 152 aa16.36■□□□□ 0.21
TMEM53-209ENST00000495630 SMIM10Q96HG1 83 aa16.36■□□□□ 0.21
TMEM53-209ENST00000495630 SEC16BQ96JE7 1060 aa16.36■□□□□ 0.21
TMEM53-209ENST00000495630 OR4K3Q96R72 315 aa16.36■□□□□ 0.21
TMEM53-209ENST00000495630 TRIM54Q9BYV2 358 aa16.36■□□□□ 0.21
TMEM53-209ENST00000495630 FBXW2Q9UKT8 454 aa16.36■□□□□ 0.21
TMEM53-209ENST00000495630 MMACHCQ9Y4U1 282 aa16.36■□□□□ 0.21
TMEM53-209ENST00000495630 NIPBLQ6KC79 2804 aaeCLIP16.36■□□□□ 0.21
TMEM53-209ENST00000495630 ZWINTO95229 277 aa16.35■□□□□ 0.21
TMEM53-209ENST00000495630 TUBB4AP04350 444 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms