RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 C2orf73Q8N5S3 287 aaPredicted RBP9.82□□□□□ -0.84
HDAC3-214ENST00000495485 EFCAB3Q8N7B9 438 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 CDC26Q8NHZ8 85 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 GPBAR1Q8TDU6 330 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 THAP11Q96EK4 314 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 PDXPQ96GD0 296 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 PRAP1Q96NZ9 151 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 PANX1Q96RD7 426 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 CDC6Q99741 560 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 MENTQ9BUN1 341 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 DUSP26Q9BV47 211 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 SPATA9Q9BWV2 254 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 GTPBP2Q9BX10 602 aaKnown RBP9.82□□□□□ -0.84
HDAC3-214ENST00000495485 BHLHE41Q9C0J9 482 aaPredicted RBP9.82□□□□□ -0.84
HDAC3-214ENST00000495485 TMEM168Q9H0V1 697 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 REEP4Q9H6H4 257 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 MYNNQ9NPC7 610 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 CMTM6Q9NX76 183 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 TBC1D29Q9UFV1 150 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 ATP6V1HQ9UI12 483 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 C15orf41Q9Y2V0 281 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 AP4S1Q9Y587 144 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 PCDHB3Q9Y5E6 796 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 SNX11Q9Y5W9 270 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 CEP295Q9C0D2 2601 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 ASXL3Q9C0F0 2248 aa9.82□□□□□ -0.84
HDAC3-214ENST00000495485 DCHS1Q96JQ0 3298 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 ASPDHA6ND91 283 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 OR52A4PA6NMU1 304 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 C9JVG2 144 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 H0Y8X5 98 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 FXYD1O00168 92 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 CAPN5O15484 640 aaPredicted RBP9.81□□□□□ -0.84
HDAC3-214ENST00000495485 ZW10O43264 779 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 PEX1O43933 1283 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 CHRM5P08912 532 aaPredicted RBP9.81□□□□□ -0.84
HDAC3-214ENST00000495485 ZCCHC18P0CG32 403 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 CD1EP15812 388 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 ACADSP16219 412 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 JUNDP17535 347 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 TSFMP43897 325 aaKnown RBP9.81□□□□□ -0.84
HDAC3-214ENST00000495485 GSK3BP49841 420 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 STXBP1P61764 594 aaKnown RBP9.81□□□□□ -0.84
HDAC3-214ENST00000495485 RPS15AP62244 130 aaKnown RBP9.81□□□□□ -0.84
HDAC3-214ENST00000495485 MRPS22P82650 360 aaKnown RBP9.81□□□□□ -0.84
HDAC3-214ENST00000495485 MS4A2Q01362 244 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 BNC1Q01954 994 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 CYP4F3Q08477 520 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 PUM1Q14671 1186 aaKnown RBP eCLIP9.81□□□□□ -0.84
HDAC3-214ENST00000495485 RUNDC3AQ59EK9 446 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 WLSQ5T9L3 541 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 ARMC6Q6NXE6 501 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 DUS1LQ6P1R4 473 aaKnown RBP9.81□□□□□ -0.84
HDAC3-214ENST00000495485 ERICH5Q6P6B1 374 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 KLHL35Q6PF15 583 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 IYDQ6PHW0 289 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 DLEU7Q6UYE1 221 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 FKBP9P1Q75LS8 142 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 IFNEQ86WN2 208 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 NUDT13Q86X67 352 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 GKN2Q86XP6 184 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 PQLC1Q8N2U9 271 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 KRTCAP2Q8N6L1 136 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 ZNF655Q8N720 491 aaPredicted RBP9.81□□□□□ -0.84
HDAC3-214ENST00000495485 LMNTD1Q8N9Z9 388 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 GPR156Q8NFN8 814 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 OR4E2Q8NGC2 313 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 OR6C4Q8NGE1 309 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 OR2A1Q8NGT9 310 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 CLHC1Q8NHS4 586 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 DNAJC9Q8WXX5 260 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 PPCDCQ96CD2 204 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 COQ8BQ96D53 544 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 FAM120BQ96EK7 910 aaKnown RBP9.81□□□□□ -0.84
HDAC3-214ENST00000495485 C11orf24Q96F05 449 aaPredicted RBP9.81□□□□□ -0.84
HDAC3-214ENST00000495485 NSMCE2Q96MF7 247 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 PPM1MQ96MI6 270 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 TMEM74Q96NL1 305 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 SARGQ9BW04 601 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 EBPLQ9BY08 206 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 KLHL4Q9C0H6 718 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 ROGDIQ9GZN7 287 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 MIEF1Q9NQG6 463 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 NLGN3Q9NZ94 848 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 ZNF282Q9UDV7 671 aaPredicted RBP9.81□□□□□ -0.84
HDAC3-214ENST00000495485 DOLKQ9UPQ8 538 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 ICKQ9UPZ9 632 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 PLEKHM1Q9Y4G2 1056 aa9.81□□□□□ -0.84
HDAC3-214ENST00000495485 RP1P56715 2156 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.8□□□□□ -0.84
HDAC3-214ENST00000495485 A0A1W2PPV9 198 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 TCRBV3S1A0A5B6 114 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 ELOVL7A1L3X0 281 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 C4orf47A7E2U8 309 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 C2orf74A8MZ97 194 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 LMO7DNF2Z398 122 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 RNASET2O00584 256 aaKnown RBP9.8□□□□□ -0.84
HDAC3-214ENST00000495485 CASQ2O14958 399 aaPredicted RBP9.8□□□□□ -0.84
HDAC3-214ENST00000495485 SCAMP1O15126 338 aa9.8□□□□□ -0.84
HDAC3-214ENST00000495485 AKAP10O43572 662 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms