RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 STK33Q9BYT3 514 aa8.12□□□□□ -1.11
GARNL3-219ENST00000495172 SLC25A51Q9H1U9 297 aa8.12□□□□□ -1.11
GARNL3-219ENST00000495172 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.12□□□□□ -1.11
GARNL3-219ENST00000495172 PCYOX1Q9UHG3 505 aa8.12□□□□□ -1.11
GARNL3-219ENST00000495172 BICDL2A1A5D9 508 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 SAGE2PA6NJ88 616 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 LRRC3CA6NJW4 275 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 MAGEB17A8MXT2 336 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 HAT1O14929 419 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 OR10H2O60403 315 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 IL18BPO95998 194 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 ATP1A3P13637 1013 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 PPP2R1BP30154 601 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 CCR8P51685 355 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 ZNF135P52742 658 aaPredicted RBP8.11□□□□□ -1.11
GARNL3-219ENST00000495172 MTTPP55157 894 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 IFI35P80217 286 aaPredicted RBP8.11□□□□□ -1.11
GARNL3-219ENST00000495172 LOXL1Q08397 574 aaPredicted RBP8.11□□□□□ -1.11
GARNL3-219ENST00000495172 SYTL3Q4VX76 610 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 FBLN7Q53RD9 439 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 PRAMEF20Q5VT98 475 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 ZDHHC20Q5W0Z9 365 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 FAM166AQ6J272 317 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 ALKBH2Q6NS38 261 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 ZNF474Q6S9Z5 364 aaPredicted RBP8.11□□□□□ -1.11
GARNL3-219ENST00000495172 SUSD1Q6UWL2 747 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 LRRC49Q8IUZ0 686 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 PIANPQ8IYJ0 282 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 PQLC3Q8N755 202 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 ZNF525Q8N782 197 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 PLPP5Q8NEB5 264 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 OR10H5Q8NGA6 315 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 LKAAEAR1Q8TD35 194 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 ASB15Q8WXK1 588 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 HS6ST2Q96MM7 605 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 SOX7Q9BT81 388 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 FICDQ9BVA6 458 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 OPN3Q9H1Y3 402 aaPredicted RBP8.11□□□□□ -1.11
GARNL3-219ENST00000495172 GANQ9H2C0 597 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 GLOD4Q9HC38 313 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 HOMER3Q9NSC5 361 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 ZDHHC3Q9NYG2 299 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 ING1Q9UK53 422 aaPredicted RBP8.11□□□□□ -1.11
GARNL3-219ENST00000495172 CFAP45Q9UL16 551 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 SLC39A10Q9ULF5 831 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 ATG4BQ9Y4P1 393 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 KLK4Q9Y5K2 254 aa8.11□□□□□ -1.11
GARNL3-219ENST00000495172 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.11□□□□□ -1.11
GARNL3-219ENST00000495172 DYNC2H1Q8NCM8 4307 aaKnown RBP8.11□□□□□ -1.11
GARNL3-219ENST00000495172 IGLV3-16A0A075B6K0 115 aa8.1□□□□□ -1.11
GARNL3-219ENST00000495172 LOC285095A0A1B0GVY8 99 aa8.1□□□□□ -1.11
GARNL3-219ENST00000495172 LRRD1A4D1F6 860 aa8.1□□□□□ -1.11
GARNL3-219ENST00000495172 CD8B2A6NJW9 211 aa8.1□□□□□ -1.11
GARNL3-219ENST00000495172 AGAP14A8MT82 685 aa8.1□□□□□ -1.11
GARNL3-219ENST00000495172 FAM157AC9JC47 383 aa8.1□□□□□ -1.11
GARNL3-219ENST00000495172 SMC2O95347 1197 aa8.1□□□□□ -1.11
GARNL3-219ENST00000495172 DANCRP0C864 163 aa8.1□□□□□ -1.11
GARNL3-219ENST00000495172 DESP17661 470 aa8.1□□□□□ -1.11
GARNL3-219ENST00000495172 HNF1AP20823 631 aa8.1□□□□□ -1.11
GARNL3-219ENST00000495172 CD68P34810 354 aaPredicted RBP8.1□□□□□ -1.11
GARNL3-219ENST00000495172 UGT2B10P36537 528 aa8.1□□□□□ -1.11
GARNL3-219ENST00000495172 BCL6P41182 706 aa8.1□□□□□ -1.11
GARNL3-219ENST00000495172 TSTA3Q13630 321 aaPredicted RBP8.1□□□□□ -1.11
GARNL3-219ENST00000495172 DPYSL3Q14195 570 aa8.1□□□□□ -1.11
GARNL3-219ENST00000495172 VWA1Q6PCB0 445 aa8.1□□□□□ -1.11
GARNL3-219ENST00000495172 NPNTQ6UXI9 565 aa8.1□□□□□ -1.11
GARNL3-219ENST00000495172 SH2D5Q6ZV89 423 aa8.1□□□□□ -1.11
GARNL3-219ENST00000495172 TAS2R42Q7RTR8 314 aa8.1□□□□□ -1.11
GARNL3-219ENST00000495172 FMR1NBQ8N0W7 255 aaPredicted RBP8.1□□□□□ -1.11
GARNL3-219ENST00000495172 RASGEF1CQ8N431 466 aa8.1□□□□□ -1.11
GARNL3-219ENST00000495172 FBXO15Q8NCQ5 510 aaPredicted RBP8.1□□□□□ -1.11
GARNL3-219ENST00000495172 IPMKQ8NFU5 416 aa8.1□□□□□ -1.11
GARNL3-219ENST00000495172 FATE1Q969F0 183 aa8.1□□□□□ -1.11
GARNL3-219ENST00000495172 C3orf49Q96BT1 292 aa8.1□□□□□ -1.11
GARNL3-219ENST00000495172 PLPPR2Q96GM1 343 aa8.1□□□□□ -1.11
GARNL3-219ENST00000495172 OXNAD1Q96HP4 312 aaPredicted RBP8.1□□□□□ -1.11
GARNL3-219ENST00000495172 MRGPRX2Q96LB1 330 aa8.1□□□□□ -1.11
GARNL3-219ENST00000495172 JSRP1Q96MG2 331 aaPredicted RBP8.1□□□□□ -1.11
GARNL3-219ENST00000495172 RASL10BQ96S79 203 aa8.1□□□□□ -1.11
GARNL3-219ENST00000495172 APOL2Q9BQE5 337 aa8.1□□□□□ -1.11
GARNL3-219ENST00000495172 AARSD1Q9BTE6 412 aaKnown RBP8.1□□□□□ -1.11
GARNL3-219ENST00000495172 TRABDQ9H4I3 376 aa8.1□□□□□ -1.11
GARNL3-219ENST00000495172 NECTIN3Q9NQS3 549 aa8.1□□□□□ -1.11
GARNL3-219ENST00000495172 ABCF3Q9NUQ8 709 aa8.1□□□□□ -1.11
GARNL3-219ENST00000495172 SMARCAL1Q9NZC9 954 aa8.1□□□□□ -1.11
GARNL3-219ENST00000495172 SH2B3Q9UQQ2 575 aa8.1□□□□□ -1.11
GARNL3-219ENST00000495172 R3HDM2Q9Y2K5 976 aaKnown RBP8.1□□□□□ -1.11
GARNL3-219ENST00000495172 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.09□□□□□ -1.11
GARNL3-219ENST00000495172 MYOCOSA0A1B0GUC4 107 aa8.09□□□□□ -1.11
GARNL3-219ENST00000495172 CFAP99D6REC4 459 aa8.09□□□□□ -1.11
GARNL3-219ENST00000495172 H0YIG0 161 aa8.09□□□□□ -1.11
GARNL3-219ENST00000495172 PES1O00541 588 aaKnown RBP8.09□□□□□ -1.11
GARNL3-219ENST00000495172 LIN7AO14910 233 aaPredicted RBP8.09□□□□□ -1.11
GARNL3-219ENST00000495172 TNFSF13O75888 250 aa8.09□□□□□ -1.11
GARNL3-219ENST00000495172 MYO1DO94832 1006 aa8.09□□□□□ -1.11
GARNL3-219ENST00000495172 NSA2O95478 260 aaKnown RBP8.09□□□□□ -1.11
GARNL3-219ENST00000495172 AGTP01019 485 aa8.09□□□□□ -1.11
GARNL3-219ENST00000495172 ACRV1P26436 265 aa8.09□□□□□ -1.11
GARNL3-219ENST00000495172 SRP14P37108 136 aaKnown RBP8.09□□□□□ -1.11
GARNL3-219ENST00000495172 JAM2P57087 298 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms