RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 ANKRD53Q8N9V6 530 aa20.69■□□□□ 0.9
HDDC3-203ENST00000494993 TRIM51Q9BSJ1 452 aa20.69■□□□□ 0.9
HDDC3-203ENST00000494993 SLC6A16Q9GZN6 736 aa20.69■□□□□ 0.9
HDDC3-203ENST00000494993 PELI2Q9HAT8 420 aa20.69■□□□□ 0.9
HDDC3-203ENST00000494993 IKZF3Q9UKT9 509 aa20.69■□□□□ 0.9
HDDC3-203ENST00000494993 DYRK1BQ9Y463 629 aa20.69■□□□□ 0.9
HDDC3-203ENST00000494993 TCRBV16S1A1N1A0A5B0 115 aa20.68■□□□□ 0.9
HDDC3-203ENST00000494993 CTAGE15A4D2H0 777 aa20.68■□□□□ 0.9
HDDC3-203ENST00000494993 URADA6NGE7 173 aa20.68■□□□□ 0.9
HDDC3-203ENST00000494993 RNH1P13489 461 aaKnown RBP20.68■□□□□ 0.9
HDDC3-203ENST00000494993 MLF1P58340 268 aa20.68■□□□□ 0.9
HDDC3-203ENST00000494993 RAB8AP61006 207 aa20.68■□□□□ 0.9
HDDC3-203ENST00000494993 HYAL2Q12891 473 aa20.68■□□□□ 0.9
HDDC3-203ENST00000494993 CTAGE6Q86UF2 777 aa20.68■□□□□ 0.9
HDDC3-203ENST00000494993 TRPV3Q8NET8 790 aa20.68■□□□□ 0.9
HDDC3-203ENST00000494993 SLCO2A1Q92959 643 aa20.68■□□□□ 0.9
HDDC3-203ENST00000494993 PDLIM5Q96HC4 596 aaKnown RBP20.68■□□□□ 0.9
HDDC3-203ENST00000494993 AIF1LQ9BQI0 150 aa20.68■□□□□ 0.9
HDDC3-203ENST00000494993 TRIM8Q9BZR9 551 aa20.68■□□□□ 0.9
HDDC3-203ENST00000494993 DDX47Q9H0S4 455 aaKnown RBP20.68■□□□□ 0.9
HDDC3-203ENST00000494993 TRIM45Q9H8W5 580 aaPredicted RBP20.68■□□□□ 0.9
HDDC3-203ENST00000494993 IGKV3D-11A0A0A0MRZ8 115 aa20.67■□□□□ 0.9
HDDC3-203ENST00000494993 CES2O00748 559 aa20.67■□□□□ 0.9
HDDC3-203ENST00000494993 CLDN14O95500 239 aa20.67■□□□□ 0.9
HDDC3-203ENST00000494993 SMIM10L1P0DMW3 83 aa20.67■□□□□ 0.9
HDDC3-203ENST00000494993 ABOP16442 354 aa20.67■□□□□ 0.9
HDDC3-203ENST00000494993 ZNF24P17028 368 aa20.67■□□□□ 0.9
HDDC3-203ENST00000494993 MAOAP21397 527 aa20.67■□□□□ 0.9
HDDC3-203ENST00000494993 HNF4AP41235 474 aa20.67■□□□□ 0.9
HDDC3-203ENST00000494993 ELK3P41970 407 aa20.67■□□□□ 0.9
HDDC3-203ENST00000494993 CYB561P49447 251 aa20.67■□□□□ 0.9
HDDC3-203ENST00000494993 CDSNQ15517 529 aa20.67■□□□□ 0.9
HDDC3-203ENST00000494993 PPP1R3AQ16821 1122 aa20.67■□□□□ 0.9
HDDC3-203ENST00000494993 TRMT10BQ6PF06 316 aaKnown RBP20.67■□□□□ 0.9
HDDC3-203ENST00000494993 TMPRSS11BQ86T26 416 aa20.67■□□□□ 0.9
HDDC3-203ENST00000494993 THOC6Q86W42 341 aaKnown RBP20.67■□□□□ 0.9
HDDC3-203ENST00000494993 ZNF227Q86WZ6 799 aa20.67■□□□□ 0.9
HDDC3-203ENST00000494993 CPSF7Q8N684 471 aaKnown RBP20.67■□□□□ 0.9
HDDC3-203ENST00000494993 NFAM1Q8NET5 270 aaPredicted RBP20.67■□□□□ 0.9
HDDC3-203ENST00000494993 MTFMTQ96DP5 389 aaKnown RBP20.67■□□□□ 0.9
HDDC3-203ENST00000494993 CFAP36Q96G28 342 aa20.67■□□□□ 0.9
HDDC3-203ENST00000494993 SMIM10Q96HG1 83 aa20.67■□□□□ 0.9
HDDC3-203ENST00000494993 LURAP1Q96LR2 239 aa20.67■□□□□ 0.9
HDDC3-203ENST00000494993 KLHL31Q9H511 634 aa20.67■□□□□ 0.9
HDDC3-203ENST00000494993 GPAMQ9HCL2 828 aa20.67■□□□□ 0.9
HDDC3-203ENST00000494993 NECTIN3Q9NQS3 549 aa20.67■□□□□ 0.9
HDDC3-203ENST00000494993 PRDM9Q9NQV7 894 aa20.67■□□□□ 0.9
HDDC3-203ENST00000494993 CHMP2BQ9UQN3 213 aa20.67■□□□□ 0.9
HDDC3-203ENST00000494993 TACC2O95359 2948 aa20.66■□□□□ 0.9
HDDC3-203ENST00000494993 C19orf84I3L1E1 186 aa20.66■□□□□ 0.9
HDDC3-203ENST00000494993 PSMD12O00232 456 aaPredicted RBP20.66■□□□□ 0.9
HDDC3-203ENST00000494993 ZNHIT1O43257 154 aa20.66■□□□□ 0.9
HDDC3-203ENST00000494993 ZNF37AP17032 561 aaPredicted RBP20.66■□□□□ 0.9
HDDC3-203ENST00000494993 POU3F2P20265 443 aaPredicted RBP20.66■□□□□ 0.9
HDDC3-203ENST00000494993 IVDP26440 423 aa20.66■□□□□ 0.9
HDDC3-203ENST00000494993 TRHRP34981 398 aaPredicted RBP20.66■□□□□ 0.9
HDDC3-203ENST00000494993 HSF1Q00613 529 aa20.66■□□□□ 0.9
HDDC3-203ENST00000494993 RNFT1Q5M7Z0 435 aa20.66■□□□□ 0.9
HDDC3-203ENST00000494993 HP1BP3Q5SSJ5 553 aaPredicted RBP20.66■□□□□ 0.9
HDDC3-203ENST00000494993 NXPE4Q6UWF7 544 aa20.66■□□□□ 0.9
HDDC3-203ENST00000494993 NCCRP1Q6ZVX7 275 aaPredicted RBP20.66■□□□□ 0.9
HDDC3-203ENST00000494993 CHERPQ8IWX8 916 aaKnown RBP20.66■□□□□ 0.9
HDDC3-203ENST00000494993 PDIK1LQ8N165 341 aa20.66■□□□□ 0.9
HDDC3-203ENST00000494993 AGAP11Q8TF27 550 aa20.66■□□□□ 0.9
HDDC3-203ENST00000494993 WDR83Q9BRX9 315 aaKnown RBP20.66■□□□□ 0.9
HDDC3-203ENST00000494993 RHBGQ9H310 441 aa20.66■□□□□ 0.9
HDDC3-203ENST00000494993 SNX12Q9UMY4 172 aa20.66■□□□□ 0.9
HDDC3-203ENST00000494993 SLC22A14Q9Y267 594 aa20.66■□□□□ 0.9
HDDC3-203ENST00000494993 F8P00451 2351 aa20.66■□□□□ 0.9
HDDC3-203ENST00000494993 EML6Q6ZMW3 1958 aa20.65■□□□□ 0.9
HDDC3-203ENST00000494993 AKAP9Q99996 3911 aa20.65■□□□□ 0.9
HDDC3-203ENST00000494993 C4orf51C9J302 202 aa20.65■□□□□ 0.9
HDDC3-203ENST00000494993 FCHO1O14526 889 aa20.65■□□□□ 0.9
HDDC3-203ENST00000494993 HLCSP50747 726 aa20.65■□□□□ 0.9
HDDC3-203ENST00000494993 ITGA8P53708 1063 aa20.65■□□□□ 0.9
HDDC3-203ENST00000494993 RBBP5Q15291 538 aaKnown RBP20.65■□□□□ 0.9
HDDC3-203ENST00000494993 TOR1AIP1Q5JTV8 583 aa20.65■□□□□ 0.9
HDDC3-203ENST00000494993 STEAP4Q687X5 459 aa20.65■□□□□ 0.9
HDDC3-203ENST00000494993 DOLPP1Q86YN1 238 aa20.65■□□□□ 0.9
HDDC3-203ENST00000494993 CA13Q8N1Q1 262 aa20.65■□□□□ 0.9
HDDC3-203ENST00000494993 ARMC10Q8N2F6 343 aa20.65■□□□□ 0.9
HDDC3-203ENST00000494993 ARMC2Q8NEN0 867 aa20.65■□□□□ 0.9
HDDC3-203ENST00000494993 CREB3L4Q8TEY5 395 aa20.65■□□□□ 0.9
HDDC3-203ENST00000494993 PHF10Q8WUB8 498 aaKnown RBP20.65■□□□□ 0.9
HDDC3-203ENST00000494993 TMEM125Q96AQ2 219 aa20.65■□□□□ 0.9
HDDC3-203ENST00000494993 DEFB126Q9BYW3 111 aa20.65■□□□□ 0.9
HDDC3-203ENST00000494993 AICDAQ9GZX7 198 aa20.65■□□□□ 0.9
HDDC3-203ENST00000494993 ZFATQ9P243 1243 aa20.65■□□□□ 0.9
HDDC3-203ENST00000494993 KCNE2Q9Y6J6 123 aa20.65■□□□□ 0.9
HDDC3-203ENST00000494993 DNAJC13O75165 2243 aa20.65■□□□□ 0.9
HDDC3-203ENST00000494993 ZNF407Q9C0G0 2248 aa20.65■□□□□ 0.9
HDDC3-203ENST00000494993 ADGRG4Q8IZF6 3080 aa20.64■□□□□ 0.9
HDDC3-203ENST00000494993 POLQO75417 2590 aa20.64■□□□□ 0.9
HDDC3-203ENST00000494993 A8MUA0 341 aa20.64■□□□□ 0.89
HDDC3-203ENST00000494993 CDC7O00311 574 aa20.64■□□□□ 0.89
HDDC3-203ENST00000494993 SERPINA6P08185 405 aa20.64■□□□□ 0.89
HDDC3-203ENST00000494993 MORF4L2Q15014 288 aa20.64■□□□□ 0.89
HDDC3-203ENST00000494993 ZNF295-AS1Q8N0V1 137 aa20.64■□□□□ 0.89
HDDC3-203ENST00000494993 POGLUT1Q8NBL1 392 aa20.64■□□□□ 0.89
HDDC3-203ENST00000494993 ANKRD7Q92527 254 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms