RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 RAD51AP1Q96B01 352 aa13.35□□□□□ -0.27
CHMP2B-205ENST00000494980 TRMT61AQ96FX7 289 aaKnown RBP13.35□□□□□ -0.27
CHMP2B-205ENST00000494980 DNAJC1Q96KC8 554 aaKnown RBP13.35□□□□□ -0.27
CHMP2B-205ENST00000494980 MACROD1Q9BQ69 325 aa13.35□□□□□ -0.27
CHMP2B-205ENST00000494980 ZNF223Q9UK11 482 aaPredicted RBP13.35□□□□□ -0.27
CHMP2B-205ENST00000494980 A0A096LNT2 108 aa13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 HAT1O14929 419 aa13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 PRKNO60260 465 aaPredicted RBP13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 LMX1BO60663 402 aa13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 CRTAMO95727 393 aa13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 FHP07954 510 aa13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 CCR7P32248 378 aa13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 VLDLRP98155 873 aa13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 CRYZQ08257 329 aaKnown RBP13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 ZNF704Q6ZNC4 412 aaPredicted RBP13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 RTL4Q6ZR62 310 aa13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 CAND1Q86VP6 1230 aaKnown RBP13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 CPNE8Q86YQ8 564 aa13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 B3GNT7Q8NFL0 401 aa13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 OR5T3Q8NGG3 340 aa13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 OR6P1Q8NGX9 317 aa13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 SREK1Q8WXA9 508 aaKnown RBP13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 ZC3HAV1LQ96H79 300 aaKnown RBP13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 ART5Q96L15 291 aa13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 CCDC138Q96M89 665 aa13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 PTCHD1Q96NR3 888 aa13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 RNF157Q96PX1 679 aa13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 APOL2Q9BQE5 337 aa13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 SFXN3Q9BWM7 321 aa13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 ANKHQ9HCJ1 492 aa13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 SACM1LQ9NTJ5 587 aa13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 IP6K2Q9UHH9 426 aa13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 ANAPC7Q9UJX3 599 aa13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 CAMK2AQ9UQM7 478 aa13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 ATG4BQ9Y4P1 393 aa13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 GTF3C3Q9Y5Q9 886 aa13.34□□□□□ -0.27
CHMP2B-205ENST00000494980 GRID2IPA4D2P6 1211 aa13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 B4GALT2O60909 372 aa13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 IGHV4-39P01824 125 aa13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 OR56A5P0C7T3 313 aa13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 CCL3P10147 92 aa13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 FERP16591 822 aa13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 IL10P22301 178 aa13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 MTTPP55157 894 aa13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 FAM27E3Q08E93 113 aa13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 WASHC5Q12768 1159 aa13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 TSTA3Q13630 321 aaPredicted RBP13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 SQLEQ14534 574 aa13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 FAM120AOSQ5T036 256 aa13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 VASNQ6EMK4 673 aa13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 SUSD1Q6UWL2 747 aa13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 PLXDC2Q6UX71 529 aa13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 PACS1Q6VY07 963 aa13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 ADCK2Q7Z695 626 aa13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 RFLNBQ8N5W9 214 aa13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 ZNF611Q8N823 705 aa13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 TBC1D20Q96BZ9 403 aa13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 SCYL1Q96KG9 808 aa13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 QRFPRQ96P65 431 aa13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 FCRL5Q96RD9 977 aa13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 TNFRSF13CQ96RJ3 184 aa13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 RASL10BQ96S79 203 aa13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 TIMP4Q99727 224 aa13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 NUP62CLQ9H1M0 184 aa13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 CHODLQ9H9P2 273 aa13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 UTP6Q9NYH9 597 aaKnown RBP13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 SAMD15Q9P1V8 674 aa13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 KLHL8Q9P2G9 620 aaPredicted RBP13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 RUVBL2Q9Y230 463 aaKnown RBP13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 NAALAD2Q9Y3Q0 740 aa13.33□□□□□ -0.28
CHMP2B-205ENST00000494980 IGHV4-30-2A0A087WSY4 118 aa13.32□□□□□ -0.28
CHMP2B-205ENST00000494980 HS3ST1O14792 307 aa13.32□□□□□ -0.28
CHMP2B-205ENST00000494980 MYO1DO94832 1006 aa13.32□□□□□ -0.28
CHMP2B-205ENST00000494980 P04436 131 aa13.32□□□□□ -0.28
CHMP2B-205ENST00000494980 MYBL1P10243 752 aa13.32□□□□□ -0.28
CHMP2B-205ENST00000494980 MAOAP21397 527 aa13.32□□□□□ -0.28
CHMP2B-205ENST00000494980 CCKARP32238 428 aa13.32□□□□□ -0.28
CHMP2B-205ENST00000494980 RPA3P35244 121 aaPredicted RBP13.32□□□□□ -0.28
CHMP2B-205ENST00000494980 RBMXP38159 391 aaKnown RBP13.32□□□□□ -0.28
CHMP2B-205ENST00000494980 CDKN1AP38936 164 aa13.32□□□□□ -0.28
CHMP2B-205ENST00000494980 ITIH4Q14624 930 aa13.32□□□□□ -0.28
CHMP2B-205ENST00000494980 SF3B4Q15427 424 aaKnown RBP eCLIP13.32□□□□□ -0.283e-6■■■□□ 15.4
CHMP2B-205ENST00000494980 TMEM214Q6NUQ4 689 aaKnown RBP13.32□□□□□ -0.28
CHMP2B-205ENST00000494980 ZNF550Q7Z398 422 aa13.32□□□□□ -0.28
CHMP2B-205ENST00000494980 VN1R4Q7Z5H5 301 aa13.32□□□□□ -0.28
CHMP2B-205ENST00000494980 PM20D2Q8IYS1 436 aa13.32□□□□□ -0.28
CHMP2B-205ENST00000494980 RASGEF1CQ8N431 466 aa13.32□□□□□ -0.28
CHMP2B-205ENST00000494980 NEK11Q8NG66 645 aa13.32□□□□□ -0.28
CHMP2B-205ENST00000494980 LKAAEAR1Q8TD35 194 aa13.32□□□□□ -0.28
CHMP2B-205ENST00000494980 ANKRD9Q96BM1 317 aaPredicted RBP13.32□□□□□ -0.28
CHMP2B-205ENST00000494980 TRIM11Q96F44 468 aa13.32□□□□□ -0.28
CHMP2B-205ENST00000494980 PRDM14Q9GZV8 571 aa13.32□□□□□ -0.28
CHMP2B-205ENST00000494980 ACKR4Q9NPB9 350 aa13.32□□□□□ -0.28
CHMP2B-205ENST00000494980 TTC7AQ9ULT0 858 aaPredicted RBP13.32□□□□□ -0.28
CHMP2B-205ENST00000494980 TCRBV16S1A1N1A0A5B0 115 aa13.31□□□□□ -0.28
CHMP2B-205ENST00000494980 A8MXE2 369 aa13.31□□□□□ -0.28
CHMP2B-205ENST00000494980 OVOL3O00110 214 aa13.31□□□□□ -0.28
CHMP2B-205ENST00000494980 WWP2O00308 870 aa13.31□□□□□ -0.28
CHMP2B-205ENST00000494980 GPC4O75487 556 aa13.31□□□□□ -0.28
CHMP2B-205ENST00000494980 C1orf105O95561 183 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms