RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 GHDCQ8N2G8 530 aa21.77■■□□□ 1.08
COL27A1-208ENST00000494780 TSNARE1Q96NA8 513 aa21.77■■□□□ 1.08
COL27A1-208ENST00000494780 PHF12Q96QT6 1004 aa21.77■■□□□ 1.08
COL27A1-208ENST00000494780 AIF1LQ9BQI0 150 aa21.77■■□□□ 1.08
COL27A1-208ENST00000494780 DDX47Q9H0S4 455 aaKnown RBP21.77■■□□□ 1.08
COL27A1-208ENST00000494780 GPAMQ9HCL2 828 aa21.77■■□□□ 1.08
COL27A1-208ENST00000494780 SNX12Q9UMY4 172 aa21.77■■□□□ 1.08
COL27A1-208ENST00000494780 IGKV3D-11A0A0A0MRZ8 115 aa21.76■■□□□ 1.07
COL27A1-208ENST00000494780 TCRBV16S1A1N1A0A5B0 115 aa21.76■■□□□ 1.07
COL27A1-208ENST00000494780 PSMD12O00232 456 aaPredicted RBP21.76■■□□□ 1.07
COL27A1-208ENST00000494780 CLDN14O95500 239 aa21.76■■□□□ 1.07
COL27A1-208ENST00000494780 SMIM10L1P0DMW3 83 aa21.76■■□□□ 1.07
COL27A1-208ENST00000494780 IVDP26440 423 aa21.76■■□□□ 1.07
COL27A1-208ENST00000494780 TRHRP34981 398 aaPredicted RBP21.76■■□□□ 1.07
COL27A1-208ENST00000494780 ELK3P41970 407 aa21.76■■□□□ 1.07
COL27A1-208ENST00000494780 RAB8AP61006 207 aa21.76■■□□□ 1.07
COL27A1-208ENST00000494780 PPP1R3AQ16821 1122 aa21.76■■□□□ 1.07
COL27A1-208ENST00000494780 NXPE4Q6UWF7 544 aa21.76■■□□□ 1.07
COL27A1-208ENST00000494780 THOC6Q86W42 341 aaKnown RBP21.76■■□□□ 1.07
COL27A1-208ENST00000494780 ANKRD53Q8N9V6 530 aa21.76■■□□□ 1.07
COL27A1-208ENST00000494780 ARMC2Q8NEN0 867 aa21.76■■□□□ 1.07
COL27A1-208ENST00000494780 SMIM10Q96HG1 83 aa21.76■■□□□ 1.07
COL27A1-208ENST00000494780 TRIM51Q9BSJ1 452 aa21.76■■□□□ 1.07
COL27A1-208ENST00000494780 PRDM9Q9NQV7 894 aa21.76■■□□□ 1.07
COL27A1-208ENST00000494780 IKZF3Q9UKT9 509 aa21.76■■□□□ 1.07
COL27A1-208ENST00000494780 KCNE2Q9Y6J6 123 aa21.76■■□□□ 1.07
COL27A1-208ENST00000494780 PKDREJQ9NTG1 2253 aa21.75■■□□□ 1.07
COL27A1-208ENST00000494780 SNRPB2P08579 225 aaKnown RBP21.75■■□□□ 1.07
COL27A1-208ENST00000494780 ABOP16442 354 aa21.75■■□□□ 1.07
COL27A1-208ENST00000494780 ZNF24P17028 368 aa21.75■■□□□ 1.07
COL27A1-208ENST00000494780 MAOAP21397 527 aa21.75■■□□□ 1.07
COL27A1-208ENST00000494780 HNF4AP41235 474 aa21.75■■□□□ 1.07
COL27A1-208ENST00000494780 HLCSP50747 726 aa21.75■■□□□ 1.07
COL27A1-208ENST00000494780 HYAL2Q12891 473 aa21.75■■□□□ 1.07
COL27A1-208ENST00000494780 STEAP4Q687X5 459 aa21.75■■□□□ 1.07
COL27A1-208ENST00000494780 TRMT10BQ6PF06 316 aaKnown RBP21.75■■□□□ 1.07
COL27A1-208ENST00000494780 TMPRSS11BQ86T26 416 aa21.75■■□□□ 1.07
COL27A1-208ENST00000494780 ARMC10Q8N2F6 343 aa21.75■■□□□ 1.07
COL27A1-208ENST00000494780 NFAM1Q8NET5 270 aaPredicted RBP21.75■■□□□ 1.07
COL27A1-208ENST00000494780 ANKRD7Q92527 254 aa21.75■■□□□ 1.07
COL27A1-208ENST00000494780 TMEM125Q96AQ2 219 aa21.75■■□□□ 1.07
COL27A1-208ENST00000494780 LRRC39Q96DD0 335 aa21.75■■□□□ 1.07
COL27A1-208ENST00000494780 CFAP36Q96G28 342 aa21.75■■□□□ 1.07
COL27A1-208ENST00000494780 CHMP2BQ9UQN3 213 aa21.75■■□□□ 1.07
COL27A1-208ENST00000494780 FCHO1O14526 889 aa21.74■■□□□ 1.07
COL27A1-208ENST00000494780 SERPINA6P08185 405 aa21.74■■□□□ 1.07
COL27A1-208ENST00000494780 ZNF37AP17032 561 aaPredicted RBP21.74■■□□□ 1.07
COL27A1-208ENST00000494780 FRG1Q14331 258 aaKnown RBP21.74■■□□□ 1.07
COL27A1-208ENST00000494780 MORF4L2Q15014 288 aa21.74■■□□□ 1.07
COL27A1-208ENST00000494780 RBBP5Q15291 538 aaKnown RBP21.74■■□□□ 1.07
COL27A1-208ENST00000494780 HP1BP3Q5SSJ5 553 aaPredicted RBP21.74■■□□□ 1.07
COL27A1-208ENST00000494780 ZNF227Q86WZ6 799 aa21.74■■□□□ 1.07
COL27A1-208ENST00000494780 CPSF7Q8N684 471 aaKnown RBP21.74■■□□□ 1.07
COL27A1-208ENST00000494780 POGLUT1Q8NBL1 392 aa21.74■■□□□ 1.07
COL27A1-208ENST00000494780 CREB3L4Q8TEY5 395 aa21.74■■□□□ 1.07
COL27A1-208ENST00000494780 PHF10Q8WUB8 498 aaKnown RBP21.74■■□□□ 1.07
COL27A1-208ENST00000494780 MTFMTQ96DP5 389 aaKnown RBP21.74■■□□□ 1.07
COL27A1-208ENST00000494780 LURAP1Q96LR2 239 aa21.74■■□□□ 1.07
COL27A1-208ENST00000494780 DEFB126Q9BYW3 111 aa21.74■■□□□ 1.07
COL27A1-208ENST00000494780 TRIM8Q9BZR9 551 aa21.74■■□□□ 1.07
COL27A1-208ENST00000494780 KLHL31Q9H511 634 aa21.74■■□□□ 1.07
COL27A1-208ENST00000494780 NECTIN3Q9NQS3 549 aa21.74■■□□□ 1.07
COL27A1-208ENST00000494780 ZFATQ9P243 1243 aa21.74■■□□□ 1.07
COL27A1-208ENST00000494780 SLC22A14Q9Y267 594 aa21.74■■□□□ 1.07
COL27A1-208ENST00000494780 CTAGE15A4D2H0 777 aa21.73■■□□□ 1.07
COL27A1-208ENST00000494780 ITGA8P53708 1063 aa21.73■■□□□ 1.07
COL27A1-208ENST00000494780 CDKL1Q00532 357 aa21.73■■□□□ 1.07
COL27A1-208ENST00000494780 RNFT1Q5M7Z0 435 aa21.73■■□□□ 1.07
COL27A1-208ENST00000494780 CTAGE6Q86UF2 777 aa21.73■■□□□ 1.07
COL27A1-208ENST00000494780 CHERPQ8IWX8 916 aaKnown RBP21.73■■□□□ 1.07
COL27A1-208ENST00000494780 EID3Q8N140 333 aa21.73■■□□□ 1.07
COL27A1-208ENST00000494780 CA13Q8N1Q1 262 aa21.73■■□□□ 1.07
COL27A1-208ENST00000494780 NKAPQ8N5F7 415 aaKnown RBP21.73■■□□□ 1.07
COL27A1-208ENST00000494780 AGAP11Q8TF27 550 aa21.73■■□□□ 1.07
COL27A1-208ENST00000494780 RHBGQ9H310 441 aa21.73■■□□□ 1.07
COL27A1-208ENST00000494780 MMACHCQ9Y4U1 282 aa21.73■■□□□ 1.07
COL27A1-208ENST00000494780 TEX264Q9Y6I9 313 aa21.73■■□□□ 1.07
COL27A1-208ENST00000494780 CDC7O00311 574 aa21.72■■□□□ 1.07
COL27A1-208ENST00000494780 HNMTP50135 292 aa21.72■■□□□ 1.07
COL27A1-208ENST00000494780 HSF1Q00613 529 aa21.72■■□□□ 1.07
COL27A1-208ENST00000494780 CDSNQ15517 529 aa21.72■■□□□ 1.07
COL27A1-208ENST00000494780 TERF2Q15554 542 aa21.72■■□□□ 1.07
COL27A1-208ENST00000494780 TOR1AIP1Q5JTV8 583 aa21.72■■□□□ 1.07
COL27A1-208ENST00000494780 SYDE1Q6ZW31 735 aaPredicted RBP21.72■■□□□ 1.07
COL27A1-208ENST00000494780 DOLPP1Q86YN1 238 aa21.72■■□□□ 1.07
COL27A1-208ENST00000494780 B3GNT7Q8NFL0 401 aa21.72■■□□□ 1.07
COL27A1-208ENST00000494780 WDR83Q9BRX9 315 aaKnown RBP21.72■■□□□ 1.07
COL27A1-208ENST00000494780 KLF13Q9Y2Y9 288 aaPredicted RBP21.72■■□□□ 1.07
COL27A1-208ENST00000494780 OARD1Q9Y530 152 aa21.72■■□□□ 1.07
COL27A1-208ENST00000494780 ASB1Q9Y576 335 aa21.72■■□□□ 1.07
COL27A1-208ENST00000494780 FBN2P35556 2912 aa21.71■■□□□ 1.07
COL27A1-208ENST00000494780 OTOGQ6ZRI0 2925 aa21.71■■□□□ 1.07
COL27A1-208ENST00000494780 NPEPPSL1A6NEC2 478 aa21.71■■□□□ 1.07
COL27A1-208ENST00000494780 A8MUA0 341 aa21.71■■□□□ 1.07
COL27A1-208ENST00000494780 C4orf51C9J302 202 aa21.71■■□□□ 1.07
COL27A1-208ENST00000494780 E9PLN8 166 aa21.71■■□□□ 1.07
COL27A1-208ENST00000494780 PRRG2O14669 202 aa21.71■■□□□ 1.07
COL27A1-208ENST00000494780 POU3F2P20265 443 aaPredicted RBP21.71■■□□□ 1.07
COL27A1-208ENST00000494780 SAT1P21673 171 aa21.71■■□□□ 1.07
COL27A1-208ENST00000494780 CLCN2P51788 898 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms