RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 SYT15Q9BQS2 421 aa3.84□□□□□ -1.79
SMC4-224ENST00000494612 BARHL1Q9BZE3 327 aa3.84□□□□□ -1.79
SMC4-224ENST00000494612 SLC5A7Q9GZV3 580 aa3.84□□□□□ -1.79
SMC4-224ENST00000494612 MTIF3Q9H2K0 278 aaKnown RBP3.84□□□□□ -1.79
SMC4-224ENST00000494612 C3orf14Q9HBI5 128 aa3.84□□□□□ -1.79
SMC4-224ENST00000494612 DNAJC17Q9NVM6 304 aaKnown RBP3.84□□□□□ -1.79
SMC4-224ENST00000494612 SLCO1C1Q9NYB5 712 aa3.84□□□□□ -1.79
SMC4-224ENST00000494612 IL36AQ9UHA7 158 aa3.84□□□□□ -1.79
SMC4-224ENST00000494612 PILRBQ9UKJ0 227 aa3.84□□□□□ -1.79
SMC4-224ENST00000494612 GPR132Q9UNW8 380 aa3.84□□□□□ -1.79
SMC4-224ENST00000494612 PA2G4Q9UQ80 394 aaKnown RBP3.84□□□□□ -1.79
SMC4-224ENST00000494612 POGZQ7Z3K3 1410 aa3.84□□□□□ -1.79
SMC4-224ENST00000494612 GOLGA3Q08378 1498 aa3.84□□□□□ -1.8
SMC4-224ENST00000494612 ABCA8O94911 1581 aa3.84□□□□□ -1.8
SMC4-224ENST00000494612 CTTNBP2Q8WZ74 1663 aa3.84□□□□□ -1.8
SMC4-224ENST00000494612 A0A1W2PRV1 198 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 CYTIPO60759 359 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 SAP30O75446 220 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 GOSR1O95249 250 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 IGLV1-44P01699 117 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 IGHEP01854 428 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 YES1P07947 543 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 C8orf89P0DMQ9 161 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 COPB2P35606 906 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 OR1D5P58170 312 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 ASIC1P78348 528 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 PPP2R5CQ13362 524 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 DRP2Q13474 957 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 TRA2AQ13595 282 aaKnown RBP eCLIP3.83□□□□□ -1.82e-6■■□□□ 11.9
SMC4-224ENST00000494612 CES4AQ5XG92 561 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 KLHL10Q6JEL2 608 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 C17orf107Q6ZR85 190 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 CHMP1BQ7LBR1 199 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 LSMEM2Q8N112 164 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 ADAD2Q8NCV1 583 aaKnown RBP3.83□□□□□ -1.8
SMC4-224ENST00000494612 MAPK15Q8TD08 544 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 HCAR2Q8TDS4 363 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 ST7LQ8TDW4 575 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 SAP25Q8TEE9 199 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 CKAP2Q8WWK9 683 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 FAM46BQ96A09 425 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 CDKN2AIPNLQ96HQ2 116 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 PRMT1Q99873 361 aaKnown RBP3.83□□□□□ -1.8
SMC4-224ENST00000494612 PITPNM3Q9BZ71 974 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 ZNF350Q9GZX5 532 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 UBQLN3Q9H347 655 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 TMEM181Q9P2C4 612 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 LIPT1Q9Y234 373 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 TMED7Q9Y3B3 224 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 FANCAO15360 1455 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 NEO1Q92859 1461 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 RAPGEF2Q9Y4G8 1499 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 FRMPD1Q5SYB0 1578 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 ABCA9Q8IUA7 1624 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 PREX1Q8TCU6 1659 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 ARID2Q68CP9 1835 aa3.83□□□□□ -1.8
SMC4-224ENST00000494612 NPHP3Q7Z494 1330 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 A0A087WZ39 114 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 A0A0B4J203 849 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 CCDC162PA2VCL2 907 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 LRRD1A4D1F6 860 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 SDR42E2A6NKP2 422 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 C15orf61A6NNL5 157 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 ZNF732B4DXR9 585 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 RAD51DO75771 328 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 GLCEO94923 617 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 NXPH2O95156 264 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 UROSP10746 265 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 AADACP22760 399 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 SRD5A2P31213 254 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 FRKP42685 505 aaPredicted RBP3.82□□□□□ -1.8
SMC4-224ENST00000494612 ADARP55265 1226 aaKnown RBP3.82□□□□□ -1.8
SMC4-224ENST00000494612 SNU13P55769 128 aaKnown RBP3.82□□□□□ -1.8
SMC4-224ENST00000494612 EFTUD2Q15029 972 aaKnown RBP eCLIP3.82□□□□□ -1.8
SMC4-224ENST00000494612 FAM189A2Q15884 450 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 HLA-BQ31612 363 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 SLC39A12Q504Y0 691 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 ARMCX4Q5H9R4 360 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 LCE3CQ5T5A8 94 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 KRTAP5-2Q701N4 177 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 COX8CQ7Z4L0 72 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 GPR141Q7Z602 305 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 AMER3Q8N944 861 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 ATP8B4Q8TF62 1192 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 GATAD1Q8WUU5 269 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 KRT35Q92764 455 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 PANX3Q96QZ0 392 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 C17orf62Q9BQA9 187 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 ACPTQ9BZG2 426 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 FBXL4Q9UKA2 621 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 ELF5Q9UKW6 265 aaPredicted RBP3.82□□□□□ -1.8
SMC4-224ENST00000494612 SATB2Q9UPW6 733 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 SELENOKQ9Y6D0 94 aa3.82□□□□□ -1.8
SMC4-224ENST00000494612 RICTORQ6R327 1708 aa3.81□□□□□ -1.8
SMC4-224ENST00000494612 TTC37Q6PGP7 1564 aa3.81□□□□□ -1.8
SMC4-224ENST00000494612 CFAP74Q9C0B2 1584 aa3.81□□□□□ -1.8
SMC4-224ENST00000494612 EFCAB5A4FU69 1503 aa3.81□□□□□ -1.8
SMC4-224ENST00000494612 DENND4BO75064 1496 aaPredicted RBP3.81□□□□□ -1.8
SMC4-224ENST00000494612 AKNAQ7Z591 1439 aa3.81□□□□□ -1.8
SMC4-224ENST00000494612 YEATS2Q9ULM3 1422 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms