RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 SPATA19Q7Z5L4 167 aa3.37□□□□□ -1.87
ITGB1-216ENST00000493758 THNSL1Q8IYQ7 743 aa3.37□□□□□ -1.87
ITGB1-216ENST00000493758 TMEM99Q8N816 258 aa3.37□□□□□ -1.87
ITGB1-216ENST00000493758 CSNK1G2-AS1Q8NCQ2 148 aa3.37□□□□□ -1.87
ITGB1-216ENST00000493758 Q8NFD4 153 aa3.37□□□□□ -1.87
ITGB1-216ENST00000493758 SSC4DQ8WTU2 575 aa3.37□□□□□ -1.87
ITGB1-216ENST00000493758 RADILQ96JH8 1075 aa3.37□□□□□ -1.87
ITGB1-216ENST00000493758 FERMT1Q9BQL6 677 aa3.37□□□□□ -1.87
ITGB1-216ENST00000493758 AP1M1Q9BXS5 423 aa3.37□□□□□ -1.87
ITGB1-216ENST00000493758 C5orf66Q9H5L9 145 aa3.37□□□□□ -1.87
ITGB1-216ENST00000493758 FAM120CQ9NX05 1096 aaKnown RBP3.37□□□□□ -1.87
ITGB1-216ENST00000493758 NOCTQ9UK39 431 aaKnown RBP3.37□□□□□ -1.87
ITGB1-216ENST00000493758 SATB2Q9UPW6 733 aa3.37□□□□□ -1.87
ITGB1-216ENST00000493758 RUVBL2Q9Y230 463 aaKnown RBP3.37□□□□□ -1.87
ITGB1-216ENST00000493758 LMO7DNF2Z398 122 aa3.36□□□□□ -1.87
ITGB1-216ENST00000493758 K7EQG2 157 aa3.36□□□□□ -1.87
ITGB1-216ENST00000493758 SCO2O43819 266 aa3.36□□□□□ -1.87
ITGB1-216ENST00000493758 KIF5CO60282 957 aa3.36□□□□□ -1.87
ITGB1-216ENST00000493758 MT-ND2P03891 347 aa3.36□□□□□ -1.87
ITGB1-216ENST00000493758 HSP90AA1P07900 732 aaKnown RBP3.36□□□□□ -1.87
ITGB1-216ENST00000493758 VIMP08670 466 aaKnown RBP3.36□□□□□ -1.87
ITGB1-216ENST00000493758 PDGFRAP16234 1089 aa3.36□□□□□ -1.87
ITGB1-216ENST00000493758 GOT1P17174 413 aa3.36□□□□□ -1.87
ITGB1-216ENST00000493758 LMO2P25791 158 aa3.36□□□□□ -1.87
ITGB1-216ENST00000493758 GP5P40197 560 aa3.36□□□□□ -1.87
ITGB1-216ENST00000493758 CAPZA1P52907 286 aa3.36□□□□□ -1.87
ITGB1-216ENST00000493758 CD300CQ08708 224 aa3.36□□□□□ -1.87
ITGB1-216ENST00000493758 TEX35Q5T0J7 233 aa3.36□□□□□ -1.87
ITGB1-216ENST00000493758 FAM46CQ5VWP2 391 aa3.36□□□□□ -1.87
ITGB1-216ENST00000493758 MEX3DQ86XN8 651 aaKnown RBP3.36□□□□□ -1.87
ITGB1-216ENST00000493758 CREBRFQ8IUR6 639 aa3.36□□□□□ -1.87
ITGB1-216ENST00000493758 C4orf19Q8IY42 314 aa3.36□□□□□ -1.87
ITGB1-216ENST00000493758 OR52B6Q8NGF0 335 aa3.36□□□□□ -1.87
ITGB1-216ENST00000493758 RIT1Q92963 219 aa3.36□□□□□ -1.87
ITGB1-216ENST00000493758 ST6GALNAC6Q969X2 333 aa3.36□□□□□ -1.87
ITGB1-216ENST00000493758 FAM162AQ96A26 154 aa3.36□□□□□ -1.87
ITGB1-216ENST00000493758 RPF1Q9H9Y2 349 aaKnown RBP3.36□□□□□ -1.87
ITGB1-216ENST00000493758 GIMAP2Q9UG22 337 aa3.36□□□□□ -1.87
ITGB1-216ENST00000493758 BAIAP2L1Q9UHR4 511 aa3.36□□□□□ -1.87
ITGB1-216ENST00000493758 GLTPD2A6NH11 291 aa3.35□□□□□ -1.87
ITGB1-216ENST00000493758 SHISA9B4DS77 424 aa3.35□□□□□ -1.87
ITGB1-216ENST00000493758 RTCAO00442 366 aaKnown RBP3.35□□□□□ -1.87
ITGB1-216ENST00000493758 PGRMC2O15173 223 aa3.35□□□□□ -1.87
ITGB1-216ENST00000493758 PRDM1O75626 825 aa3.35□□□□□ -1.87
ITGB1-216ENST00000493758 KRTAP1-4P0C5Y4 121 aa3.35□□□□□ -1.87
ITGB1-216ENST00000493758 IFNAR1P17181 557 aa3.35□□□□□ -1.87
ITGB1-216ENST00000493758 PSMB4P28070 264 aa3.35□□□□□ -1.87
ITGB1-216ENST00000493758 FEN1P39748 380 aaKnown RBP3.35□□□□□ -1.87
ITGB1-216ENST00000493758 IER3P46695 156 aa3.35□□□□□ -1.87
ITGB1-216ENST00000493758 CLCN4P51793 760 aa3.35□□□□□ -1.87
ITGB1-216ENST00000493758 ZFP36L1Q07352 338 aaKnown RBP3.35□□□□□ -1.87
ITGB1-216ENST00000493758 GCKRQ14397 625 aa3.35□□□□□ -1.87
ITGB1-216ENST00000493758 PLPP4Q5VZY2 271 aa3.35□□□□□ -1.87
ITGB1-216ENST00000493758 PIGWQ7Z7B1 504 aa3.35□□□□□ -1.87
ITGB1-216ENST00000493758 SLC25A42Q86VD7 318 aa3.35□□□□□ -1.87
ITGB1-216ENST00000493758 CD99L2Q8TCZ2 262 aa3.35□□□□□ -1.87
ITGB1-216ENST00000493758 HNRNPABQ99729 332 aaKnown RBP3.35□□□□□ -1.87
ITGB1-216ENST00000493758 ZNF577Q9BSK1 485 aa3.35□□□□□ -1.87
ITGB1-216ENST00000493758 PINK1Q9BXM7 581 aa3.35□□□□□ -1.87
ITGB1-216ENST00000493758 POMT2Q9UKY4 750 aa3.35□□□□□ -1.87
ITGB1-216ENST00000493758 SPATA31D1Q6ZQQ2 1576 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 ILVBLA1L0T0 632 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 BCLAF3A2AJT9 711 aaKnown RBP3.34□□□□□ -1.87
ITGB1-216ENST00000493758 TCP10L2B9ZVM9 353 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 E5RGE8 158 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 IFIT3O14879 490 aaKnown RBP3.34□□□□□ -1.87
ITGB1-216ENST00000493758 OGTO15294 1046 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 INPP4BO15327 924 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 SIGLEC5O15389 551 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 FGF19O95750 216 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 IGHG1P01857 330 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 RPN1P04843 607 aaKnown RBP3.34□□□□□ -1.87
ITGB1-216ENST00000493758 APOA4P06727 396 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 TSPY3P0CV98 308 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 TSPY8P0CW00 308 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 CASTP20810 708 aaKnown RBP3.34□□□□□ -1.87
ITGB1-216ENST00000493758 CTNNA2P26232 953 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 SSTR1P30872 391 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 CRKLP46109 303 aaKnown RBP3.34□□□□□ -1.87
ITGB1-216ENST00000493758 OR3A1P47881 315 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 ATP4BP51164 291 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 BAIAP2L2Q6UXY1 529 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 SPATA21Q7Z572 469 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 C5orf24Q7Z6I8 188 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 CATSPER3Q86XQ3 398 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 ZC3H3Q8IXZ2 948 aaKnown RBP3.34□□□□□ -1.87
ITGB1-216ENST00000493758 FBXL16Q8N461 479 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 C4orf32Q8N8J7 132 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 SETD6Q8TBK2 473 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 DNASE1L2Q92874 299 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 SIPA1Q96FS4 1042 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 INTS14Q96SY0 518 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 CCDC28BQ9BUN5 200 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 NACAP1Q9BZK3 213 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 MOB1AQ9H8S9 216 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 IL1RAPQ9NPH3 570 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 MIS18AQ9NYP9 233 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 DBF4Q9UBU7 674 aaPredicted RBP3.34□□□□□ -1.87
ITGB1-216ENST00000493758 NSG2Q9Y328 171 aa3.34□□□□□ -1.87
ITGB1-216ENST00000493758 IGHV3-16A0A0C4DH30 117 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms