RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 SERPINA6P08185 405 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 IMPDH1P20839 514 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 CASP2P42575 452 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 STXBP1P61764 594 aaKnown RBP10.99□□□□□ -0.65
CTSA-209ENST00000493522 SKP1P63208 163 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 PHEXP78562 749 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 PCDH1Q08174 1060 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 E2F2Q14209 437 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 CPSF6Q16630 551 aaKnown RBP eCLIP10.99□□□□□ -0.65
CTSA-209ENST00000493522 CRTC2Q53ET0 693 aaPredicted RBP10.99□□□□□ -0.65
CTSA-209ENST00000493522 LACTB2Q53H82 288 aaPredicted RBP10.99□□□□□ -0.65
CTSA-209ENST00000493522 CFAP157Q5JU67 520 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 LIPJQ5W064 366 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 COX15Q7KZN9 410 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 ABHD13Q7L211 337 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 PRSS41Q7RTY9 318 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 HDXQ7Z353 690 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 VN1R5Q7Z5H4 357 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 EXOC3L1Q86VI1 746 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 LAS2Q8IYD9 372 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 ARHGEF39Q8N4T4 335 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 FAM26EQ8N5C1 309 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 OR4F6Q8NGB9 312 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 OR9A4Q8NGU2 314 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 CREB3L4Q8TEY5 395 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 FKBP10Q96AY3 582 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 REPS1Q96D71 796 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 SEC16BQ96JE7 1060 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 YIPF2Q9BWQ6 316 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 GPR87Q9BY21 358 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 SLC6A16Q9GZN6 736 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 CTSFQ9UBX1 484 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 ZNF490Q9ULM2 529 aaPredicted RBP10.99□□□□□ -0.65
CTSA-209ENST00000493522 STK38LQ9Y2H1 464 aa10.99□□□□□ -0.65
CTSA-209ENST00000493522 SPTAN1Q13813 2472 aaKnown RBP10.99□□□□□ -0.65
CTSA-209ENST00000493522 A0A0G2JN53 185 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 CLEC18AA5D8T8 446 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 SGK494L7N484 410 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 ERI3O43414 337 aaKnown RBP10.98□□□□□ -0.65
CTSA-209ENST00000493522 FOXS1O43638 330 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 TYROBPO43914 113 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 SH3BGRLO75368 114 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 RDH16O75452 317 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 OR4F21O95013 312 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 NSA2O95478 260 aaKnown RBP10.98□□□□□ -0.65
CTSA-209ENST00000493522 CAPN1P07384 714 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 RAB40ALP0C0E4 278 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 ALOX12P18054 663 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 PTPN4P29074 926 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 SERPINB1P30740 379 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 HPDP32754 393 aaPredicted RBP10.98□□□□□ -0.65
CTSA-209ENST00000493522 FOLR3P41439 243 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 RAB8AP61006 207 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 SNRPNP63162 240 aaKnown RBP10.98□□□□□ -0.65
CTSA-209ENST00000493522 MAT1AQ00266 395 aaKnown RBP10.98□□□□□ -0.65
CTSA-209ENST00000493522 ASPHQ12797 758 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 HYAL2Q12891 473 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 KLRB1Q12918 225 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 LCP2Q13094 533 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 DSG2Q14126 1118 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 FAM53BQ14153 422 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 HERC3Q15034 1050 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 ZRSR2Q15696 482 aaKnown RBP10.98□□□□□ -0.65
CTSA-209ENST00000493522 DEFB109BQ30KR1 87 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 GGTA1PQ4G0N0 100 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 DEFB134Q4QY38 66 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 TNFAIP8L3Q5GJ75 292 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 FAM69BQ5VUD6 431 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 LIPMQ5VYY2 423 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 TTC19Q6DKK2 380 aaPredicted RBP10.98□□□□□ -0.65
CTSA-209ENST00000493522 TRIM40Q6P9F5 258 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 CLEC18BQ6UXF7 455 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 GPRIN3Q6ZVF9 776 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 MILR1Q7Z6M3 343 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 ATCAYQ86WG3 371 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 C10orf107Q8IVU9 208 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 L3MBTL4Q8NA19 623 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 CLEC18CQ8NCF0 446 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 OR7G3Q8NG95 312 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 UTP15Q8TED0 518 aaKnown RBP10.98□□□□□ -0.65
CTSA-209ENST00000493522 ZNF473Q8WTR7 871 aaKnown RBP10.98□□□□□ -0.65
CTSA-209ENST00000493522 SREK1Q8WXA9 508 aaKnown RBP10.98□□□□□ -0.65
CTSA-209ENST00000493522 GAL3ST3Q96A11 431 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 ABHD17AQ96GS6 310 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 MAGEB10Q96LZ2 347 aaPredicted RBP10.98□□□□□ -0.65
CTSA-209ENST00000493522 ZNF382Q96SR6 550 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 MECRQ9BV79 373 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 NTMT1Q9BV86 223 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 MS4A8Q9BY19 250 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 RHBGQ9H310 441 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 GSTO2Q9H4Y5 243 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 KLHL31Q9H511 634 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 TMBIM4Q9HC24 238 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 SSU72Q9NP77 194 aaKnown RBP10.98□□□□□ -0.65
CTSA-209ENST00000493522 KCNK9Q9NPC2 374 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 DMRT3Q9NQL9 472 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 SLC22A11Q9NSA0 550 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 OXSMQ9NWU1 459 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 HCN3Q9P1Z3 774 aa10.98□□□□□ -0.65
CTSA-209ENST00000493522 TRPC4Q9UBN4 977 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms