RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 ALKBH1Q13686 389 aaKnown RBP4.04□□□□□ -1.76
BRCA1-220ENST00000492859 SLC17A1Q14916 467 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 PCOLCEQ15113 449 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 CHI3L2Q15782 390 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 PSG3Q16557 428 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 TRIM16LQ309B1 348 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 NDUFAF6Q330K2 333 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 PTCHD3Q3KNS1 767 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 XKR7Q5GH72 579 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 GPR107Q5VW38 600 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 PRAMEF7Q5VXH5 474 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 TIGD3Q6B0B8 471 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 CYB5R2Q6BCY4 276 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 BHLHB9Q6PI77 547 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 ZDHHC24Q6UX98 284 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 UNQ6494/PRO21346Q6UXR6 183 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 ASCL4Q6XD76 172 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 C11orf57Q6ZUT1 292 aaPredicted RBP4.04□□□□□ -1.76
BRCA1-220ENST00000492859 FAM90A1Q86YD7 464 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 MMAAQ8IVH4 418 aaKnown RBP4.04□□□□□ -1.76
BRCA1-220ENST00000492859 YAF2Q8IY57 180 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 ZBED8Q8IZ13 594 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 ZNF276Q8N554 614 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 ACBD4Q8NC06 268 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 PAPD5Q8NDF8 572 aaKnown RBP4.04□□□□□ -1.76
BRCA1-220ENST00000492859 OR5D13Q8NGL4 314 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 PNPT1Q8TCS8 783 aaKnown RBP4.04□□□□□ -1.76
BRCA1-220ENST00000492859 RAET1EQ8TD07 263 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 ACTRT1Q8TDG2 376 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 BPIFB1Q8TDL5 484 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 C22orf15Q8WYQ4 148 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 EMG1Q92979 244 aaKnown RBP4.04□□□□□ -1.76
BRCA1-220ENST00000492859 CAVIN3Q969G5 261 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 UBE2FQ969M7 185 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 FAM46BQ96A09 425 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 SYTL4Q96C24 671 aaPredicted RBP4.04□□□□□ -1.76
BRCA1-220ENST00000492859 FBXO17Q96EF6 278 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 ARSGQ96EG1 525 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 DYDC2Q96IM9 177 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 CPB2Q96IY4 423 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 TSSK3Q96PN8 268 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 GPR20Q99678 358 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 P2RY13Q9BPV8 354 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 COPS4Q9BT78 406 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 MED10Q9BTT4 135 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 MYL10Q9BUA6 226 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 ABHD6Q9BV23 337 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 FICDQ9BVA6 458 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 WWP1Q9H0M0 922 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 SLC38A1Q9H2H9 487 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 CDIP1Q9H305 208 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 NSUN3Q9H649 340 aaKnown RBP4.04□□□□□ -1.76
BRCA1-220ENST00000492859 WDCPQ9H6R7 721 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 GREM2Q9H772 168 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 CAB39LQ9H9S4 337 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 MAGEF1Q9HAY2 307 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 NMUR1Q9HB89 426 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 HHATLQ9HCP6 504 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 LYRM4Q9HD34 91 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 RNF146Q9NTX7 359 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 TMEM161AQ9NX61 479 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 ALKBH4Q9NXW9 302 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 TAS2R9Q9NYW1 312 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 PTTG3PQ9NZH4 202 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 STOX2Q9P2F5 926 aaPredicted RBP4.04□□□□□ -1.76
BRCA1-220ENST00000492859 PRSS50Q9UI38 385 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 NUP50Q9UKX7 468 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 ASB1Q9Y576 335 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 CDY2AQ9Y6F7 541 aa4.04□□□□□ -1.76
BRCA1-220ENST00000492859 EIF3AQ14152 1382 aaKnown RBP4.04□□□□□ -1.76
BRCA1-220ENST00000492859 TMEM265A0A087WTH1 108 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 SLC5A10A0PJK1 596 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 MBLAC1A4D2B0 266 aaPredicted RBP4.03□□□□□ -1.76
BRCA1-220ENST00000492859 MAGEA13PA6NCF6 341 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 A8MUI8 341 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 HEPACAM2A8MVW5 462 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 ARHGEF33A8MVX0 844 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 H3BMM5 538 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 MAN2B1O00754 1011 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 STX7O15400 261 aaKnown RBP4.03□□□□□ -1.76
BRCA1-220ENST00000492859 DPM1O60762 260 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 MOSPD3O75425 235 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 ITGA10O75578 1167 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 GATBO75879 557 aaKnown RBP4.03□□□□□ -1.76
BRCA1-220ENST00000492859 RGS9O75916 674 aaPredicted RBP4.03□□□□□ -1.76
BRCA1-220ENST00000492859 IFNA16P05015 189 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 SLC2A1P11166 492 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 MMP9P14780 707 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 PFKFB1P16118 471 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 PPP3CBP16298 524 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 ZNF18P17022 549 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 TPSB2P20231 275 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 HLA-DMAP28067 261 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 SLC6A4P31645 630 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 SHMT2P34897 504 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 SERPINB5P36952 375 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 STAT6P42226 847 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 MAGEA2P43356 314 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 MMP15P51511 669 aa4.03□□□□□ -1.76
BRCA1-220ENST00000492859 GNG2P59768 71 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms