RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 MLNRO43193 412 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 ARHGEF9O43307 516 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 B4GAT1O43505 415 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 GMNNO75496 209 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 ATP6V1B1P15313 513 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 CYCSP99999 105 aaKnown RBP3.41□□□□□ -1.86
CLK1-213ENST00000492793 SLC3A1Q07837 685 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 ARHGAP1Q07960 439 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 TRA2AQ13595 282 aaKnown RBP eCLIP3.41□□□□□ -1.862e-9■■■■□ 22.8
CLK1-213ENST00000492793 MORF4L2Q15014 288 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 FUT11Q495W5 492 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 PRAMEF8Q5VWM4 474 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 Q6ZRP5 223 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 TMEM126BQ8IUX1 230 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 SIAH3Q8IW03 269 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 TEX26Q8N6G2 289 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 ZNF713Q8N859 430 aaPredicted RBP3.41□□□□□ -1.86
CLK1-213ENST00000492793 AMER3Q8N944 861 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 SPC24Q8NBT2 197 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 RNF149Q8NC42 400 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 CHURC1Q8WUH1 139 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 KRT35Q92764 455 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 CASP10Q92851 521 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 SLCO2A1Q92959 643 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 BPIFA2Q96DR5 249 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 RASL10BQ96S79 203 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 PCDHB18PQ96TA0 734 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 KRT12Q99456 494 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 HOXD1Q9GZZ0 328 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 UPF3AQ9H1J1 476 aaKnown RBP3.41□□□□□ -1.86
CLK1-213ENST00000492793 MED20Q9H944 212 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 GPR173Q9NS66 373 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 NLGN3Q9NZ94 848 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 MDFICQ9P1T7 246 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 SH3GLB1Q9Y371 365 aa3.41□□□□□ -1.86
CLK1-213ENST00000492793 CACNB4O00305 520 aaPredicted RBP3.4□□□□□ -1.87
CLK1-213ENST00000492793 CLN5O75503 358 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 GOSR1O95249 250 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 LYNP07948 512 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 VCLP18206 1134 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 AOC1P19801 751 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 MT3P25713 68 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 PDHA2P29803 388 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 FEN1P39748 380 aaKnown RBP3.4□□□□□ -1.87
CLK1-213ENST00000492793 SERPINH1P50454 418 aaKnown RBP3.4□□□□□ -1.87
CLK1-213ENST00000492793 SMSP52788 366 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 HUNKP57058 714 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 ERVK11-1P61568 191 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 IRX1P78414 480 aaPredicted RBP3.4□□□□□ -1.87
CLK1-213ENST00000492793 C17orf67Q0P5P2 114 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 CNTN1Q12860 1018 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 LCP2Q13094 533 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 SRSF9Q13242 221 aaKnown RBP eCLIP3.4□□□□□ -1.87
CLK1-213ENST00000492793 PPP2R5CQ13362 524 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 CEACAM7Q14002 265 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 GRB14Q14449 540 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 NECTIN1Q15223 517 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 SLC39A12Q504Y0 691 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 AGAP6Q5VW22 663 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 LYPLAL1Q5VWZ2 237 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 TCEAL6Q6IPX3 200 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 NHLRC1Q6VVB1 395 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 KIF6Q6ZMV9 814 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 ASPGQ86U10 573 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 ZNF444Q8N0Y2 327 aaPredicted RBP3.4□□□□□ -1.87
CLK1-213ENST00000492793 ELMOD1Q8N336 334 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 FAM46BQ96A09 425 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 ULK4Q96C45 1275 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 SNRNP40Q96DI7 357 aaKnown RBP3.4□□□□□ -1.87
CLK1-213ENST00000492793 CNRIP1Q96F85 164 aaPredicted RBP3.4□□□□□ -1.87
CLK1-213ENST00000492793 FAM218AQ96MZ4 157 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 IWS1Q96ST2 819 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 OPRPNQ99935 248 aaPredicted RBP3.4□□□□□ -1.87
CLK1-213ENST00000492793 OSBPL8Q9BZF1 889 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 MTHFD2LQ9H903 347 aaPredicted RBP3.4□□□□□ -1.87
CLK1-213ENST00000492793 KCNK13Q9HB14 408 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 UBE2TQ9NPD8 197 aaPredicted RBP3.4□□□□□ -1.87
CLK1-213ENST00000492793 BARHL2Q9NY43 387 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 ERRFI1Q9UJM3 462 aaPredicted RBP3.4□□□□□ -1.87
CLK1-213ENST00000492793 ZNF510Q9Y2H8 683 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 ETV7Q9Y603 341 aa3.4□□□□□ -1.87
CLK1-213ENST00000492793 SPATA31D1Q6ZQQ2 1576 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 A0A087X0K7 114 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 IQCMA0A1B0GVH7 501 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 TRIM64A6NGJ6 449 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 GLTPD2A6NH11 291 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 TRIM64BA6NI03 449 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 H0YIG0 161 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 SIGLEC5O15389 551 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 KRT86O43790 486 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 ECE2O60344 883 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 LRCH4O75427 683 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 GSTA2P09210 222 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 TRIM49P0CI25 452 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 TRIM49CP0CI26 452 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 SKILP12757 684 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 C4BPBP20851 252 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 GJB2P29033 226 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 GPR183P32249 361 aa3.39□□□□□ -1.87
CLK1-213ENST00000492793 HNF4AP41235 474 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms