RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 CYP4X1Q8N118 509 aa12.33□□□□□ -0.44
USF1-206ENST00000491629 CCDC89Q8N998 374 aa12.33□□□□□ -0.44
USF1-206ENST00000491629 NINJ1Q92982 152 aa12.33□□□□□ -0.44
USF1-206ENST00000491629 TMEM125Q96AQ2 219 aa12.33□□□□□ -0.44
USF1-206ENST00000491629 SARGQ9BW04 601 aa12.33□□□□□ -0.44
USF1-206ENST00000491629 SGPP1Q9BX95 441 aa12.33□□□□□ -0.44
USF1-206ENST00000491629 FRMD8P1Q9BZ68 369 aaPredicted RBP12.33□□□□□ -0.44
USF1-206ENST00000491629 AICDAQ9GZX7 198 aa12.33□□□□□ -0.44
USF1-206ENST00000491629 FBXO6Q9NRD1 293 aaPredicted RBP12.33□□□□□ -0.44
USF1-206ENST00000491629 INTS10Q9NVR2 710 aaKnown RBP12.33□□□□□ -0.44
USF1-206ENST00000491629 DNAJB12Q9NXW2 375 aaKnown RBP12.33□□□□□ -0.44
USF1-206ENST00000491629 KLHL42Q9P2K6 505 aa12.33□□□□□ -0.44
USF1-206ENST00000491629 ST6GALNAC2Q9UJ37 374 aa12.33□□□□□ -0.44
USF1-206ENST00000491629 PDE10AQ9Y233 779 aa12.33□□□□□ -0.44
USF1-206ENST00000491629 DRG1Q9Y295 367 aaKnown RBP12.33□□□□□ -0.44
USF1-206ENST00000491629 CLDN16Q9Y5I7 305 aa12.33□□□□□ -0.44
USF1-206ENST00000491629 LIPGQ9Y5X9 500 aa12.33□□□□□ -0.44
USF1-206ENST00000491629 NPIPA2E9PIF3 369 aa12.32□□□□□ -0.44
USF1-206ENST00000491629 NPIPA3F8WFD2 350 aa12.32□□□□□ -0.44
USF1-206ENST00000491629 TGFBR3LH3BV60 316 aa12.32□□□□□ -0.44
USF1-206ENST00000491629 ALOX12P18054 663 aa12.32□□□□□ -0.44
USF1-206ENST00000491629 ADH7P40394 386 aa12.32□□□□□ -0.44
USF1-206ENST00000491629 BASP1P80723 227 aaKnown RBP12.32□□□□□ -0.44
USF1-206ENST00000491629 FOLH1Q04609 750 aa12.32□□□□□ -0.44
USF1-206ENST00000491629 HYAL2Q12891 473 aa12.32□□□□□ -0.44
USF1-206ENST00000491629 NAE1Q13564 534 aa12.32□□□□□ -0.44
USF1-206ENST00000491629 HERC3Q15034 1050 aa12.32□□□□□ -0.44
USF1-206ENST00000491629 GXYLT1Q4G148 440 aa12.32□□□□□ -0.44
USF1-206ENST00000491629 ZNF470Q6ECI4 717 aa12.32□□□□□ -0.44
USF1-206ENST00000491629 ARHGAP11AQ6P4F7 1023 aa12.32□□□□□ -0.44
USF1-206ENST00000491629 AGTRAPQ6RW13 159 aa12.32□□□□□ -0.44
USF1-206ENST00000491629 KIAA0408Q6ZU52 694 aa12.32□□□□□ -0.44
USF1-206ENST00000491629 C17orf64Q86WR6 236 aa12.32□□□□□ -0.44
USF1-206ENST00000491629 TMEM139Q8IV31 216 aa12.32□□□□□ -0.44
USF1-206ENST00000491629 CYP4Z2PQ8N1L4 340 aa12.32□□□□□ -0.44
USF1-206ENST00000491629 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.32□□□□□ -0.44
USF1-206ENST00000491629 OR4K1Q8NGD4 311 aa12.32□□□□□ -0.44
USF1-206ENST00000491629 OR5M9Q8NGP3 310 aa12.32□□□□□ -0.44
USF1-206ENST00000491629 KCNJ9Q92806 393 aa12.32□□□□□ -0.44
USF1-206ENST00000491629 OR4K3Q96R72 315 aa12.32□□□□□ -0.44
USF1-206ENST00000491629 DEFB126Q9BYW3 111 aa12.32□□□□□ -0.44
USF1-206ENST00000491629 TSPY26PQ9H489 355 aa12.32□□□□□ -0.44
USF1-206ENST00000491629 ZDHHC11Q9H8X9 412 aa12.32□□□□□ -0.44
USF1-206ENST00000491629 A0A0G2JNJ9 132 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 TRBV11-1A0A0K0K1C0 115 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 FAM237BA0A1B0GVD1 139 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 NDUFS4O43181 175 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 PROM1O43490 865 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 CEP104O60308 925 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 ITGA10O75578 1167 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 FAM155BO75949 473 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 ZWINTO95229 277 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 SLC35G6P0C7Q6 338 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 ZNF888P0CJ79 500 aaPredicted RBP12.31□□□□□ -0.44
USF1-206ENST00000491629 GLI4P10075 376 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 ENO3P13929 434 aaPredicted RBP12.31□□□□□ -0.44
USF1-206ENST00000491629 TPSB2P20231 275 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 KCNJ1P48048 391 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 ADAM8P78325 824 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 TPSAB1Q15661 275 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 PHKG1Q16816 387 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 TTLL9Q3SXZ7 439 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 XKR6Q5GH73 641 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 MEI1Q5TIA1 1274 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 LCTLQ6UWM7 567 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 MTERF4Q7Z6M4 381 aaKnown RBP12.31□□□□□ -0.44
USF1-206ENST00000491629 CAND1Q86VP6 1230 aaKnown RBP12.31□□□□□ -0.44
USF1-206ENST00000491629 ZZZ3Q8IYH5 903 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 SYCE1Q8N0S2 351 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 AGGF1Q8N302 714 aaeCLIP12.31□□□□□ -0.44
USF1-206ENST00000491629 CHDHQ8NE62 594 aaPredicted RBP12.31□□□□□ -0.44
USF1-206ENST00000491629 ABHD11Q8NFV4 315 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 UTP15Q8TED0 518 aaKnown RBP12.31□□□□□ -0.44
USF1-206ENST00000491629 EEF1AKMT1Q8WVE0 214 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 SMR3AQ99954 134 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 GPATCH1Q9BRR8 931 aaKnown RBP12.31□□□□□ -0.44
USF1-206ENST00000491629 TTYH2Q9BSA4 534 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 DESI2Q9BSY9 194 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 TRIM5Q9C035 493 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 KLHL31Q9H511 634 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 LIN28AQ9H9Z2 209 aaKnown RBP12.31□□□□□ -0.44
USF1-206ENST00000491629 KCMF1Q9P0J7 381 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 ZFATQ9P243 1243 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 Q9UFV3 132 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 PLEKHA6Q9Y2H5 1048 aa12.31□□□□□ -0.44
USF1-206ENST00000491629 CSPG4Q6UVK1 2322 aa12.3□□□□□ -0.44
USF1-206ENST00000491629 ZCWPW2A0A1B0GU75 182 aa12.3□□□□□ -0.44
USF1-206ENST00000491629 USP27XA6NNY8 438 aa12.3□□□□□ -0.44
USF1-206ENST00000491629 FAM166BA8MTA8 275 aa12.3□□□□□ -0.44
USF1-206ENST00000491629 FCHO1O14526 889 aa12.3□□□□□ -0.44
USF1-206ENST00000491629 SLC16A5O15375 505 aa12.3□□□□□ -0.44
USF1-206ENST00000491629 OR1F1O43749 312 aa12.3□□□□□ -0.44
USF1-206ENST00000491629 GLSO94925 669 aaPredicted RBP12.3□□□□□ -0.44
USF1-206ENST00000491629 HAUS5O94927 633 aa12.3□□□□□ -0.44
USF1-206ENST00000491629 SMIM10L1P0DMW3 83 aa12.3□□□□□ -0.44
USF1-206ENST00000491629 JAK1P23458 1154 aa12.3□□□□□ -0.44
USF1-206ENST00000491629 ACVR2AP27037 513 aa12.3□□□□□ -0.44
USF1-206ENST00000491629 PPP2R1BP30154 601 aa12.3□□□□□ -0.44
USF1-206ENST00000491629 SLC1A2P43004 574 aa12.3□□□□□ -0.44
USF1-206ENST00000491629 PWP1Q13610 501 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms