RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 LRRC37A5PQ49AS3 106 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 FASTKD1Q53R41 847 aaKnown RBP3.33□□□□□ -1.88
CD46-216ENST00000490278 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 AGAP6Q5VW22 663 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 TCEAL6Q6IPX3 200 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 FAAP20Q6NZ36 180 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 SLC27A4Q6P1M0 643 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 LRRTM1Q86UE6 522 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 SMYD1Q8NB12 490 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 SAP25Q8TEE9 199 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 RFT1Q96AA3 541 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 MOCOSQ96EN8 888 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 PCDHB18PQ96TA0 734 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 ZNF559Q9BR84 538 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 TRIM51Q9BSJ1 452 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 CACNG6Q9BXT2 260 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 UPF3AQ9H1J1 476 aaKnown RBP3.33□□□□□ -1.88
CD46-216ENST00000490278 DBF4Q9UBU7 674 aaPredicted RBP3.33□□□□□ -1.88
CD46-216ENST00000490278 ASIC3Q9UHC3 531 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 NEDD4P46934 1319 aa3.33□□□□□ -1.88
CD46-216ENST00000490278 LOC105371242A0A075B767 164 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 A0A087X0K7 114 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 IQCMA0A1B0GVH7 501 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 MEX3AA1L020 520 aaKnown RBP3.32□□□□□ -1.88
CD46-216ENST00000490278 MAGEB16A2A368 324 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 ZNF732B4DXR9 585 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 H0YIG0 161 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 MLNRO43193 412 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 DCXO43602 365 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 ECE2O60344 883 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 CLN5O75503 358 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 LETM1O95202 739 aaPredicted RBP3.32□□□□□ -1.88
CD46-216ENST00000490278 UROSP10746 265 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 DPEP1P16444 411 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 C4BPBP20851 252 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 UGT1A4P22310 534 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 KRTAP5-9P26371 169 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 GIFP27352 417 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 PDHA2P29803 388 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 MAGEB1P43366 347 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 TMEM50BP56557 158 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 SLC34A1Q06495 639 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 SLC3A1Q07837 685 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 FASTKD3Q14CZ7 662 aaKnown RBP3.32□□□□□ -1.88
CD46-216ENST00000490278 MORF4L2Q15014 288 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 FCN2Q15485 313 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 MAPK11Q15759 364 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 FAM189A2Q15884 450 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 ACKR1Q16570 336 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 MOGAT2Q3SYC2 334 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 ODF2Q5BJF6 829 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 SPANXN4Q5MJ08 99 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 ZNF613Q6PF04 617 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 SIGLEC15Q6ZMC9 328 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 ZNF497Q6ZNH5 498 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 C17orf107Q6ZR85 190 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 KCTD9Q7L273 389 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 C10orf53Q8N6V4 93 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 RNF149Q8NC42 400 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 RPLP0P6Q8NHW5 317 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 SEPT8Q92599 483 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 PTP4A1Q93096 173 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 AP2M1Q96CW1 435 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 CNRIP1Q96F85 164 aaPredicted RBP3.32□□□□□ -1.88
CD46-216ENST00000490278 PANX3Q96QZ0 392 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 PAPOLGQ9BWT3 736 aaKnown RBP3.32□□□□□ -1.88
CD46-216ENST00000490278 RNPEPL1Q9HAU8 725 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 C3orf14Q9HBI5 128 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 NDE1Q9NXR1 346 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 THEGQ9P2T0 379 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 PLCL2Q9UPR0 1127 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 TMED7Q9Y3B3 224 aa3.32□□□□□ -1.88
CD46-216ENST00000490278 CCDC162PA2VCL2 907 aa3.31□□□□□ -1.88
CD46-216ENST00000490278 GLTPD2A6NH11 291 aa3.31□□□□□ -1.88
CD46-216ENST00000490278 TCP10L2B9ZVM9 353 aa3.31□□□□□ -1.88
CD46-216ENST00000490278 H7C423 109 aa3.31□□□□□ -1.88
CD46-216ENST00000490278 K7EQD1 137 aa3.31□□□□□ -1.88
CD46-216ENST00000490278 M0R296 226 aa3.31□□□□□ -1.88
CD46-216ENST00000490278 RNF103O00237 685 aa3.31□□□□□ -1.88
CD46-216ENST00000490278 TLX2O43763 284 aaPredicted RBP3.31□□□□□ -1.88
CD46-216ENST00000490278 GAS8-AS1O95177 125 aa3.31□□□□□ -1.88
CD46-216ENST00000490278 ZNF883P0CG24 379 aa3.31□□□□□ -1.88
CD46-216ENST00000490278 EDNRAP25101 427 aa3.31□□□□□ -1.88
CD46-216ENST00000490278 GPR183P32249 361 aa3.31□□□□□ -1.88
CD46-216ENST00000490278 SERPINB6P35237 376 aa3.31□□□□□ -1.88
CD46-216ENST00000490278 FEN1P39748 380 aaKnown RBP3.31□□□□□ -1.88
CD46-216ENST00000490278 HNF4AP41235 474 aa3.31□□□□□ -1.88
CD46-216ENST00000490278 VEGFCP49767 419 aa3.31□□□□□ -1.88
CD46-216ENST00000490278 KHKP50053 298 aa3.31□□□□□ -1.88
CD46-216ENST00000490278 CLCN4P51793 760 aa3.31□□□□□ -1.88
CD46-216ENST00000490278 BTG1P62324 171 aa3.31□□□□□ -1.88
CD46-216ENST00000490278 CNTN1Q12860 1018 aa3.31□□□□□ -1.88
CD46-216ENST00000490278 CALCOCO2Q13137 446 aa3.31□□□□□ -1.88
CD46-216ENST00000490278 LCLAT1Q6UWP7 414 aa3.31□□□□□ -1.88
CD46-216ENST00000490278 KRTAP7-1Q8IUC3 87 aa3.31□□□□□ -1.88
CD46-216ENST00000490278 DND1Q8IYX4 353 aaKnown RBP3.31□□□□□ -1.88
CD46-216ENST00000490278 CD99L2Q8TCZ2 262 aa3.31□□□□□ -1.88
CD46-216ENST00000490278 BPIFA2Q96DR5 249 aa3.31□□□□□ -1.88
CD46-216ENST00000490278 ZNF599Q96NL3 588 aa3.31□□□□□ -1.88
CD46-216ENST00000490278 AGAP3Q96P47 875 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms